PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027346655.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 701aa MW: 77641.9 Da PI: 8.2553

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027346655.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.3	1.4e-23	111	212	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ +++ + t++ +d +g+ W++++iyr++++r++lt+GW+ Fv++++L +gD+vvF + + XP_027346655.1 111 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TVVAKDVHGELWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSVVFL--RAE 201 89**************************986445444..8********************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_027346655.1 202 NGDLCVGIRRA 212 8999**997 PP
2	Auxin_resp	115.9	3.5e-38	274	357	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a++ a++k +FevvY+Prast+eF+vk++ v++a++++++ GmRfkm fetedss++++ +Gt+++v+ +dp+rWpnS+Wr+L+ XP_027346655.1 274 AVTLAASKYPFEVVYYPRASTPEFCVKASAVRAAMRIQWCSGMRFKMPFETEDSSRISWfMGTIASVQVVDPIRWPNSPWRLLQ 357 678899****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MTRVFSMKEG EKSLDPQLWH ACAGGMVQMP QVNSKVFYFP QGHAEHAHTN VDLRVPPLIL 60 CKVAAVKFMA DPETDEVFAK ISLVPLKSSE LGYDEDGGDE VLETSEKPAS FAKTLTQSDA 120 NNGGGFSVPR YCAETIFPRL DYSAEPPVQT VVAKDVHGEL WKFRHIYRGT PRRHLLTTGW 180 STFVNQKKLV AGDSVVFLRA ENGDLCVGIR RAKKGIGGGG SEASSGWSSA SGNCGVGAYG 240 GFSFFMREEN KMLRNGCGGL SGRARVRPEA VVEAVTLAAS KYPFEVVYYP RASTPEFCVK 300 ASAVRAAMRI QWCSGMRFKM PFETEDSSRI SWFMGTIASV QVVDPIRWPN SPWRLLQVTW 360 DEPDLLQNVK RVSPWLVELV SNMPAINFTP FSPPRKKLRF PQHPDFPLDV QFPIPTFSGN 420 QLGPNNPLCG LSDNAPAGIQ GARHAQIGIS LSDLHLNNKL QLGLLPTNSQ QHEVHSGISN 480 GNMTNHDKSK ESLSCLLTMG KSNKSLEKSD GVEKHQFLLF GQPILTEQQI SRGCSRNALS 540 HNFTRKNSLD EDKDKEKCFF DDSQSTFSQQ FSPGKDSAAE FSWQLGLDTG HCKVFLESED 600 VGRTLDLSRL GSYEELYRRL ANMFDIERSK IFNHVFYRDA TGVVKQTGDE PFGDFMKTAK 660 RLTILTNSGS KSVRRAWITG TRNGEHGLDA SNKTGPLSIF A

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MTRVFSMKEG EKSLDPQLWH ACAGGMVQMP QVNSKVFYFP QGHAEHAHTN VDLRVPPLIL  60
CKVAAVKFMA DPETDEVFAK ISLVPLKSSE LGYDEDGGDE VLETSEKPAS FAKTLTQSDA  120
NNGGGFSVPR YCAETIFPRL DYSAEPPVQT VVAKDVHGEL WKFRHIYRGT PRRHLLTTGW  180
STFVNQKKLV AGDSVVFLRA ENGDLCVGIR RAKKGIGGGG SEASSGWSSA SGNCGVGAYG  240
GFSFFMREEN KMLRNGCGGL SGRARVRPEA VVEAVTLAAS KYPFEVVYYP RASTPEFCVK  300
ASAVRAAMRI QWCSGMRFKM PFETEDSSRI SWFMGTIASV QVVDPIRWPN SPWRLLQVTW  360
DEPDLLQNVK RVSPWLVELV SNMPAINFTP FSPPRKKLRF PQHPDFPLDV QFPIPTFSGN  420
QLGPNNPLCG LSDNAPAGIQ GARHAQIGIS LSDLHLNNKL QLGLLPTNSQ QHEVHSGISN  480
GNMTNHDKSK ESLSCLLTMG KSNKSLEKSD GVEKHQFLLF GQPILTEQQI SRGCSRNALS  540
HNFTRKNSLD EDKDKEKCFF DDSQSTFSQQ FSPGKDSAAE FSWQLGLDTG HCKVFLESED  600
VGRTLDLSRL GSYEELYRRL ANMFDIERSK IFNHVFYRDA TGVVKQTGDE PFGDFMKTAK  660
RLTILTNSGS KSVRRAWITG TRNGEHGLDA SNKTGPLSIF A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28350.1	0.0	ARF family protein