PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346628.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 543aa    MW: 60509.6 Da    PI: 6.5929
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS287.83e-881795422374
            GRAS   2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     +e L+++A+++++++l+laqa+L+rl+++ ++p g+p++R+a++f+ AL++ l++s  +     + + +s  + +++++ +k+fs +sPi+ fs 
  XP_027346628.1 179 IEELIRAADCFDNNHLQLAQAILERLNQRlRAPIGKPLHRAAFHFKDALQSLLSGSNRTG----SNRLSSMAEIVQTIKTFKAFSGISPIPMFSI 269
                     679*************************99*************************44444....44444444599******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +t+Nqa+le ++g++ +HiiDf+i+ G+Q+++L++++a++  ++ p lRiT+v+++e   + e + ++e+L++fA+ lg++++ +++  +++e++
  XP_027346628.1 270 FTTNQALLETLHGSSFIHIIDFEIGLGIQYASLMKEMAEKVaGNLPLLRITAVVPEE--YAVESRLIRENLNQFAHDLGIRVQVDFVPLRTFEAV 362
                     **************************************9997889**********66..99999**********************9999***** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adh.nsesFlerflealeyysalfdsleaklpres.. 279
                     ++++ r+  gE++aV l+ +++  l + +s+     ++L  v+++sP vvv+v+ e  ++   ++sF ++++++le+ys++++sl+a++ +    
  XP_027346628.1 363 SFKAVRFADGEKIAVLLSPAIFCRLGSGGSSVA---AFLADVRRMSPGVVVFVDGEgwTEAaAAASFRRGVVNSLEFYSMMLESLDASVVAGGgg 454
                     *************************77777777...********************543444677********************9998777667 PP

            GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++ + +E  ll+++   +v  +g++          Wre++  aG++pv+ls++a  qa++ll+kv+ +g++ve+++++lvl W++r++v++SaWr
  XP_027346628.1 455 DWVRRIEMLLLRPKMLVAVESAGRR-------TPPWREAFYGAGMRPVQLSQFADFQAECLLAKVQIRGFHVEKRQAELVLFWHGRAMVATSAWR 542
                     9999*********998777777775.......79************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MRVPSSSPQT NNHSSNSKLT QNPNPNHNPN PNLVLHTPPS NNQTFSYEPT SVLDLCRSPS  60
PEKKPTVPKA EADPNLELDD HVLPNLDWWD SIMKDLALPE DSANPLLKPT NINSDNLNSN  120
SCIPDFPPFD HPQDFLEIYS NQNLPFNYNT SNALDHSVHD FSHHHHHNNT NTNTNWDFIE  180
ELIRAADCFD NNHLQLAQAI LERLNQRLRA PIGKPLHRAA FHFKDALQSL LSGSNRTGSN  240
RLSSMAEIVQ TIKTFKAFSG ISPIPMFSIF TTNQALLETL HGSSFIHIID FEIGLGIQYA  300
SLMKEMAEKV AGNLPLLRIT AVVPEEYAVE SRLIRENLNQ FAHDLGIRVQ VDFVPLRTFE  360
AVSFKAVRFA DGEKIAVLLS PAIFCRLGSG GSSVAAFLAD VRRMSPGVVV FVDGEGWTEA  420
AAAASFRRGV VNSLEFYSMM LESLDASVVA GGGGDWVRRI EMLLLRPKML VAVESAGRRT  480
PPWREAFYGA GMRPVQLSQF ADFQAECLLA KVQIRGFHVE KRQAELVLFW HGRAMVATSA  540
WRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-158GRAS family protein