PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027346544.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | LBD | ||||||||
Protein Properties | Length: 210aa MW: 23660 Da PI: 7.3584 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 113.8 | 1.2e-35 | 7 | 106 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +C aCk lrrkC+++C +ap+fp e++++f+++h++FG +v ++lk++pee re+++++lvy+Aear+rdPv+G++++i++ +++l+ql+++l+ XP_027346544.1 7 PCGACKSLRRKCVAECLFAPHFPVENRQQFECMHHVFGSGHVASILKRVPEEARENIIKTLVYQAEARVRDPVHGCIALITEFENKLHQLQTDLE 101 7********************************************************************************************** PP DUF260 96 llkee 100 ++k+e XP_027346544.1 102 KAKKE 106 *9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MTTRSTPCGA CKSLRRKCVA ECLFAPHFPV ENRQQFECMH HVFGSGHVAS ILKRVPEEAR 60 ENIIKTLVYQ AEARVRDPVH GCIALITEFE NKLHQLQTDL EKAKKELSSY VSPHVMEAFL 120 LNPTSILMPH SYPPVFTYSG HEMAPPFLIL DPQRQDQEMK FNAVYKVVGV GGSVDTSQMQ 180 QQQGEHRVPH ATHNDSGAQQ QLLDQSNSKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66870.1 | 4e-41 | LBD family protein |