PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027346496.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

GRAS

Protein Properties

Length: 347aa MW: 39624.9 Da PI: 10.2049

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027346496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	121.2	1.2e-37	55	204	3	156
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 +lL++cA+av+ ++++a+ lL+++++++s gd ++Rla+yf+ +L++rla +++ly +++ ++ ++ l+a+klf+ sP+ ++s+l XP_027346496.1 55 TLLTQCAQAVAGYNQRNANDLLKQIRQHSSRFGDGLHRLAHYFAIGLETRLAA-GTQLYMPFEVATA-----ADMLKAYKLFVTPSPLQRMSNLF 143 69************************************************9.9999966665555.....69***************** PP GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..ske 156 + ++I v +e+ vH +Df+i +G+Q p+L+++L +R++gpp+l+i g++ p+sg +e XP_027346496.1 144 TTKTIISLVRNESSVHLVDFGICYGFQLPCLIRKLLERQGGPPRLQIIGIDLPQSGfrPAE 204 *************************************************9998766444 PP
2	GRAS	46.4	6.8e-15	241	344	260	373
GRAS 260 aleyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee 354 a++++s+lfd+++a++ re+ +r ++E+ l+gr++ nv+ace + r+er +++Wr r +a k+v+l+ + +k r+++ + + v e+ XP_027346496.1 241 AFYHFSSLFDMFDANVQREEPQREMLEKGLFGRNAINVLACEAE-RVERP--YKQWRVRNLRARVKQVRLDPELMK------REYH-KNFVVAED 325 899************************************987.57765..69***********9987655......6777.55** PP GRAS 355 sgslvlgWkdrpLvsvSaW 373 ++ ++gWk+ L ++ aW XP_027346496.1 326 GKWDFQGWKGLILNVFYAW 344 ***********999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MRCCYVKLEE VKLPFVLPTH HKLLIQEGGC NGKSIRSRLK KDSTNTGGTA VDLWTLLTQC 60 AQAVAGYNQR NANDLLKQIR QHSSRFGDGL HRLAHYFAIG LETRLAAGTQ LYMPFEVATA 120 ADMLKAYKLF VTPSPLQRMS NLFTTKTIIS LVRNESSVHL VDFGICYGFQ LPCLIRKLLE 180 RQGGPPRLQI IGIDLPQSGF RPAERVEPLR KPGGIWRTTA RSSSLSGRLI QTSSSVVYSM 240 AFYHFSSLFD MFDANVQREE PQREMLEKGL FGRNAINVLA CEAERVERPY KQWRVRNLRA 300 RVKQVRLDPE LMKREYHKNF VVAEDGKWDF QGWKGLILNV FYAWVPA

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MRCCYVKLEE VKLPFVLPTH HKLLIQEGGC NGKSIRSRLK KDSTNTGGTA VDLWTLLTQC  60
AQAVAGYNQR NANDLLKQIR QHSSRFGDGL HRLAHYFAIG LETRLAAGTQ LYMPFEVATA  120
ADMLKAYKLF VTPSPLQRMS NLFTTKTIIS LVRNESSVHL VDFGICYGFQ LPCLIRKLLE  180
RQGGPPRLQI IGIDLPQSGF RPAERVEPLR KPGGIWRTTA RSSSLSGRLI QTSSSVVYSM  240
AFYHFSSLFD MFDANVQREE PQREMLEKGL FGRNAINVLA CEAERVERPY KQWRVRNLRA  300
RVKQVRLDPE LMKREYHKNF VVAEDGKWDF QGWKGLILNV FYAWVPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59450.1	1e-49	GRAS family protein