PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346442.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family TCP
Protein Properties Length: 333aa    MW: 36507.1 Da    PI: 6.6565
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346442.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP113.52.9e-35201242112
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.ssssaseceaesssssasnsssgkaaksaa 95 
                     +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++akp+i++l+++ ++ ++   ++e+++++a+    g++   + 
  XP_027346442.1  20 TGRKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKPSIDKLAELpPFHPS---TNEEDQNNAA----GSSTIMTI 107
                     79**************************************************************533333...2222222222....34444444 PP

             TCP  96 kskksqksaasalnlak 112
                      ++++q+s+++  n++ 
  XP_027346442.1 108 AQEQQQHSESCGYNFQL 124
                     77777777777766654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MRSSGGEIVQ VEGGHIIKST GRKDRHSKVY TSKGPRDRRV RLSAHTAIEF YDVQDRLGYD  60
RPSKAVDWLI KKAKPSIDKL AELPPFHPST NEEDQNNAAG SSTIMTIAQE QQQHSESCGY  120
NFQLQRQLGA FISPQVDTDP IALFPTTSTT SSINFQNNNP TQNLGLSLHC FQDHPGLIHW  180
QSQQDGANQT PPSNEHQIQT LFGSTPIGFE NENQYHRIVT LNNEAAAAAA TTTTTTTDHV  240
NRLGFMLNSQ PFLGHGSASV YSQSGTLQSN FSFPMTSSEH HRSPPIHQAS IFGSRFVSDG  300
LAGFCIPDRI QGVEENHEIA SNGPSSSSPS SIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53230.16e-49TCP family protein