PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027346371.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 365aa MW: 41013.2 Da PI: 6.8503

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027346371.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.1	3.2e-13	192	239	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f L ++P + kK++Ka++Le A++Y+k+Lq XP_027346371.1 192 QDHVIAERKRREKLSQRFIALSAIVPGL-----KKMDKATVLEDAIKYVKQLQ 239 6799**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MSFGSSNSSD QVLCPIPYIQ ESELKMTQLS STMYLPELGM EEPTLFHQYP MDSFAFQLDD 60 LDFESFSASP KSYSSHKRSF PVESPQQSIA PSRPTEHHKT VTTWSAYGSD LIAPKPSSSS 120 SSKIISFEHS NASSVASQQF YNTDASVKKP KIETGCGENL DFAAYENKSF LNYDKQENKA 180 ATATTRNPTQ AQDHVIAERK RREKLSQRFI ALSAIVPGLK KMDKATVLED AIKYVKQLQE 240 RVNTLEERVA DKTVEKAVFV KRSFVCTDDG SSPSDENSDQ SFPEIEARIS CKEVLIRIHC 300 NKHSGRVATI LTELEKHHLT VQSSSFLPFG NNTLDITIVA QMNKEYCLTA KDLIRNLRES 360 LRKLI

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MSFGSSNSSD QVLCPIPYIQ ESELKMTQLS STMYLPELGM EEPTLFHQYP MDSFAFQLDD  60
LDFESFSASP KSYSSHKRSF PVESPQQSIA PSRPTEHHKT VTTWSAYGSD LIAPKPSSSS  120
SSKIISFEHS NASSVASQQF YNTDASVKKP KIETGCGENL DFAAYENKSF LNYDKQENKA  180
ATATTRNPTQ AQDHVIAERK RREKLSQRFI ALSAIVPGLK KMDKATVLED AIKYVKQLQE  240
RVNTLEERVA DKTVEKAVFV KRSFVCTDDG SSPSDENSDQ SFPEIEARIS CKEVLIRIHC  300
NKHSGRVATI LTELEKHHLT VQSSSFLPFG NNTLDITIVA QMNKEYCLTA KDLIRNLRES  360
LRKLI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	198	203	ERKRRE
2	199	204	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	4e-58	bHLH family protein