PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346370.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 263aa    MW: 30135.8 Da    PI: 5.7922
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346370.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.26e-1860113356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k+++++ eq+++Le+ Fe  +++  e++ +LA+ lgL+ rq+ +WFqNrRa++k
  XP_027346370.1  60 KKRRLNIEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 113
                     4557899**********************************************9 PP
2HD-ZIP_I/II130.66.4e-4259149191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     ekkrrl+ eqvk+LE+sFe  +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+y+a+k++n++L++++++L++e+
  XP_027346370.1  59 EKKRRLNIEQVKTLEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYEAIKADNDALQAQNQKLQTEI 149
                     69**************************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MAFFPANFML QTPHQDDHQP PPSLNSFLGK RSMSFSGLEL GEEANVEEEL SDDGSQAGEK  60
KRRLNIEQVK TLEKSFELGN KLEPERKMQL ARALGLQPRQ IAIWFQNRRA RWKTKQLEKD  120
YDLLKRQYEA IKADNDALQA QNQKLQTEIL ALKSREPTES INLNKETEGS SSNRSENSSD  180
IKLDISRTPA IDSPLSTQQN SRTLFPPSAR PTGVAQLFQT TSRPELQCQK IDHMVKEESF  240
SNMFCAIDDQ SGLWPWLEQQ HFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108116RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.15e-93HD-ZIP family protein