PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346279.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family Whirly
Protein Properties Length: 268aa    MW: 29754.7 Da    PI: 9.5989
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346279.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly201.31.3e-62912291139
          Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 
                     s+yk+kaal++ ++ p+f  ldsg++k++r+G +ll++a+a+++r+ydW++kq+f+ls+ e++++++l+++esceffhdp +++s+eGkvrk+lk
  XP_027346279.1  91 SIYKGKAALTLTPRPPEFAPLDSGAFKISREGYVLLQFAPAVGQRQYDWNRKQVFSLSVGEMGSVISLGTRESCEFFHDPLKGKSDEGKVRKVLK 185
                     7********************************************************************************************** PP

          Whirly  96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                     +eP+pdGsG+f+n+sv+n+lv+++e++s+Pv+kae avl s ++
  XP_027346279.1 186 LEPFPDGSGHFFNFSVQNKLVNVDENMSIPVTKAELAVLSSTFN 229
                     ***************************************99885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MLNLQLQLHS PPSPLSSSSS LSSSSSYASL KLFPNHSFSP NTLPFNTPKP FTLRCRHSDL  60
FAQNTLASTP RPARPTPSVG ALPPRVYVGY SIYKGKAALT LTPRPPEFAP LDSGAFKISR  120
EGYVLLQFAP AVGQRQYDWN RKQVFSLSVG EMGSVISLGT RESCEFFHDP LKGKSDEGKV  180
RKVLKLEPFP DGSGHFFNFS VQNKLVNVDE NMSIPVTKAE LAVLSSTFNF IMPYLLGWHT  240
FANSIKPDDY NGENNANPRY GGDYEWNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14410.11e-111Whirly family protein