PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346188.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 769aa    MW: 87039.5 Da    PI: 5.5636
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346188.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS376.92.6e-1153967661373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ cA+ vss+d   a+++L ++++++   gd +qRla +f++AL+arla+ ++++y al++++ts    ++ ++a++++  ++P+ k+++
  XP_027346188.1 396 LRTLLILCAQSVSSDDRVTANEILRQIQQHSHMLGDGTQRLANCFANALEARLAGAGTQIYTALSSKKTS---AADMVKAYQMYISACPFKKLAF 487
                     5789**************************************************************9999...99******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN++Il  ++  e++Hi+Df+i +G+QWpaL+  L++Rp+gpp+lRiTg++ p++g   +e+++etg rLa+++++++vpfefn  +a+++e+
  XP_027346188.1 488 IFANHTILHLAKDVETLHIVDFGIRYGFQWPALIYRLSKRPGGPPKLRITGIELPQPGfrPAERVQETGLRLARYCDRFNVPFEFND-IAQKWET 581
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L++k++E laVn++++ ++l+de+v l+s+rd+vLkl+++ +P +++++  + ++n++ F++rf eal +y++lfd l++++++++  r 
  XP_027346188.1 582 IKIEDLKIKENELLAVNCMFRFQNLPDETVVLNSPRDTVLKLIRKANPAIFIHATVNGSYNAPFFVTRFREALFHYATLFDVLDTNVAHDDPMRL 676
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     + Ere++gr+++n++aceg+er+er et+++W+ r ++aGF+++pl+++  ++ ++ l+ v+   +++ e+ + +++gWk+r +++ S+W
  XP_027346188.1 677 MFEREFFGRQVMNIIACEGSERVERPETYKQWQVRNMRAGFRQLPLDQQLINKLRCKLKAVYHSDFMLLEDANYMLQGWKGRVVYASSCW 766
                     **************************************************************777************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 769 aa     Download sequence    
MSYQKTMLII RFFSLSLFQT TIIEDLMDPH FNNDVKFNQL ANSLDVEDQC LDPANRIMKT  60
LDFGFMDNPF LLPPYPNAVQ TTSEEDSPLD ETDFSATVLR YINQMLMEED MEEKPCMFHD  120
FLALQAAEKS LYDVIGETYP SSSSSIQNYH NVETPDGSNF SGYSSSGTTS TSNSVESHWS  180
NIDLTDYKHS MLQTTFPADF VFQASSQPSM KTTSTFTVTD AGFLASSAAG FLDSSSSLLS  240
KSESVLQFER GVEEASKFLP KGNPLIIDLE NGSFIPSFSK VPQQLEVKME RDEREHLSAE  300
SRGRKNHERE DEADLQDGRS NKHSAVYSDD SEISELFDKV LLGTRCGNEA APLCNFKEDQ  360
PNGADASVQQ KEETTKFGGG KSRVKKQGNK KGVVDLRTLL ILCAQSVSSD DRVTANEILR  420
QIQQHSHMLG DGTQRLANCF ANALEARLAG AGTQIYTALS SKKTSAADMV KAYQMYISAC  480
PFKKLAFIFA NHTILHLAKD VETLHIVDFG IRYGFQWPAL IYRLSKRPGG PPKLRITGIE  540
LPQPGFRPAE RVQETGLRLA RYCDRFNVPF EFNDIAQKWE TIKIEDLKIK ENELLAVNCM  600
FRFQNLPDET VVLNSPRDTV LKLIRKANPA IFIHATVNGS YNAPFFVTRF REALFHYATL  660
FDVLDTNVAH DDPMRLMFER EFFGRQVMNI IACEGSERVE RPETYKQWQV RNMRAGFRQL  720
PLDQQLINKL RCKLKAVYHS DFMLLEDANY MLQGWKGRVV YASSCWVPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein