PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027346168.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | GATA | ||||||||
Protein Properties | Length: 314aa MW: 34988.2 Da PI: 5.5235 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 47.9 | 1.8e-15 | 176 | 212 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg ++ Tp +Rrgp g+++LCnaCGl+++ kg+ XP_027346168.1 176 CQHCGISEksTPAMRRGPAGPRSLCNACGLMWANKGT 212 *****99999************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence |
MDAGVNNPSE GRVVVVPMHV DYANGTDEGE EASSAMNSRT SELTISFEGE VYVFPAVTPE 60 KVQAVLLLLG GQEMPNSIPT SDYLLQQNCQ DIRTINDSSR SSKLSRRIAS LVRFREKRKE 120 RCFEKKIRYS CRKEVAQRMH RKNGQFASLK EDYKSPTENW DSSNGTPCPE STERRCQHCG 180 ISEKSTPAMR RGPAGPRSLC NACGLMWANK GTLRDLSKAG RIAFEQNELD TSADIKPSTT 240 EPENSGADQE KEGSPEETKP VPMDSRQSPE KTNEQFILDT AEAVTDNLSM QVENHALSLH 300 EQVLMSRLIL MIPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 9e-57 | GATA family protein |