PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346128.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 221aa    MW: 25624.4 Da    PI: 4.7357
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346128.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.55.3e-192173456
                    -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++++ +q+++Le+ Fe ++++  e++++LA++lgL+ rqV +WFqNrRa++k
  XP_027346128.1 21 KRRLSFDQVKALERSFEVDNKLEPERKTKLAEELGLQPRQVAIWFQNRRARWK 73
                    4578889*********************************************9 PP
2HD-ZIP_I/II129.61.2e-4119111193
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     ekkrrls +qvk+LE+sFe ++kLeperK++la+eLglqprqva+WFqnrRAR+ktkqlE+dy +Lk++yd lk e ++Le+e+e+L+ +l+e
  XP_027346128.1  19 EKKRRLSFDQVKALERSFEVDNKLEPERKTKLAEELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNYDVLKVEYHNLEQENEALTIKLRE 111
                     69*************************************************************************************988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MLDRLDQEDS YEDGSSVLEK KRRLSFDQVK ALERSFEVDN KLEPERKTKL AEELGLQPRQ  60
VAIWFQNRRA RWKTKQLERD YGVLKSNYDV LKVEYHNLEQ ENEALTIKLR ELKEKLSRGG  120
AESNELVKEE SPISEVRDRG ASESNSNGVV KEEINDDSLL CVNGSLPSSS SLMNWLHYSD  180
SDSRGSPDKT FQTHFMRMEE PSFFSINEFC NFFSVDQSPT L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12049KKRRLSFDQVKALERSFEVDNKLEPERKTK
26876RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65310.11e-48HD-ZIP family protein