PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346057.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 728aa    MW: 79543.1 Da    PI: 5.7387
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346057.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.41.6e-2059114156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  XP_027346057.1  59 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114
                     688999***********************************************999 PP
2START227.63.7e-712494691206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el+ +a+ +ep+W +      +++n+de++++f+++ +     ++ ea+r+++vv+m++++lve+l+d++ qW++ +     +a+tl
  XP_027346057.1 249 ELAVAAMEELIGMAQMGEPLWLTTLdgtaTMLNEDEYIRSFPRGIGpkptgFKCEASRETAVVIMNHVNLVEILMDVN-QWSTVFSgivsRAMTL 342
                     57899**************************************999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m+aelq+++plvp R+++fvRy++q+ +g+w++vdvS+d+ ++ p    ++R++++pSg+li++++ng+skvtwvehv
  XP_027346057.1 343 EVLSTGvagnynGALQVMTAELQLPTPLVPtRESYFVRYCKQHADGTWAVVDVSLDNLRPSP----SARCRRRPSGCLIQEMPNGYSKVTWVEHV 433
                     ************************************************************99....5**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+wvatl+rqce+
  XP_027346057.1 434 EVDDRGVHSLYKQLVSSGHAFGAKRWVATLDRQCER 469
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 728 aa     Download sequence    
MFQPNLMEAG QLHPLEMGQN TSESDVPRIR EDEFDSATKS GSENHEGASG EDQDPRPKKK  60
RYHRHTQHQI QEMEAFFKEC PHPDDKQRKE LSRELGLEPL QVKFWFQNKR TQMKTQHERH  120
ENTQLRAENE KLRADNMRYR EALSNASCPN CGGPTAIGEM SFDEHHLRLE NARLREEIDR  180
ISAIAAKYVG KPVVNYSNIS PSLPPRPLEL GVGAGFGGQP GIGVDMYGAG DLLRSISGPT  240
EADKPIIIEL AVAAMEELIG MAQMGEPLWL TTLDGTATML NEDEYIRSFP RGIGPKPTGF  300
KCEASRETAV VIMNHVNLVE ILMDVNQWST VFSGIVSRAM TLEVLSTGVA GNYNGALQVM  360
TAELQLPTPL VPTRESYFVR YCKQHADGTW AVVDVSLDNL RPSPSARCRR RPSGCLIQEM  420
PNGYSKVTWV EHVEVDDRGV HSLYKQLVSS GHAFGAKRWV ATLDRQCERL ASAMATNIPT  480
VDVGVITNQE GRKSMMKLAE RMVISFCAGV SASTAHTWTT LSGTGADDVR VMTRKSVDDP  540
GRPPGIVLSA ATSFWLPVPP KRVFDFLRDE NSRNEWDILS NGGVVQEMAH IANGRDTGNC  600
VSLLRVNSAN SSQSNMLILQ ESCTDSTGSF VIYAPVDIVA MNVVLNGGDP DYVALLPSGF  660
AILPDGTTVH GSGIGETAPG GSLLTVAFQI LVDSVPTAKL SLGSVATVNN LIACTVERIK  720
ASLSGESA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein