PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346056.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 760aa    MW: 82651.7 Da    PI: 5.9548
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.31.7e-2091146156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  XP_027346056.1  91 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
                     688999***********************************************999 PP
2START227.54e-712815011206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el+ +a+ +ep+W +      +++n+de++++f+++ +     ++ ea+r+++vv+m++++lve+l+d++ qW++ +     +a+tl
  XP_027346056.1 281 ELAVAAMEELIGMAQMGEPLWLTTLdgtaTMLNEDEYIRSFPRGIGpkptgFKCEASRETAVVIMNHVNLVEILMDVN-QWSTVFSgivsRAMTL 374
                     57899**************************************999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m+aelq+++plvp R+++fvRy++q+ +g+w++vdvS+d+ ++ p    ++R++++pSg+li++++ng+skvtwvehv
  XP_027346056.1 375 EVLSTGvagnynGALQVMTAELQLPTPLVPtRESYFVRYCKQHADGTWAVVDVSLDNLRPSP----SARCRRRPSGCLIQEMPNGYSKVTWVEHV 465
                     ************************************************************99....5**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+wvatl+rqce+
  XP_027346056.1 466 EVDDRGVHSLYKQLVSSGHAFGAKRWVATLDRQCER 501
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 760 aa     Download sequence    
MLAGVIIPAR NMPSMITRIN NGGGFGSSSA LTLGQPNLME AGQLHPLEMG QNTSESDVPR  60
IREDEFDSAT KSGSENHEGA SGEDQDPRPK KKRYHRHTQH QIQEMEAFFK ECPHPDDKQR  120
KELSRELGLE PLQVKFWFQN KRTQMKTQHE RHENTQLRAE NEKLRADNMR YREALSNASC  180
PNCGGPTAIG EMSFDEHHLR LENARLREEI DRISAIAAKY VGKPVVNYSN ISPSLPPRPL  240
ELGVGAGFGG QPGIGVDMYG AGDLLRSISG PTEADKPIII ELAVAAMEEL IGMAQMGEPL  300
WLTTLDGTAT MLNEDEYIRS FPRGIGPKPT GFKCEASRET AVVIMNHVNL VEILMDVNQW  360
STVFSGIVSR AMTLEVLSTG VAGNYNGALQ VMTAELQLPT PLVPTRESYF VRYCKQHADG  420
TWAVVDVSLD NLRPSPSARC RRRPSGCLIQ EMPNGYSKVT WVEHVEVDDR GVHSLYKQLV  480
SSGHAFGAKR WVATLDRQCE RLASAMATNI PTVDVGVITN QEGRKSMMKL AERMVISFCA  540
GVSASTAHTW TTLSGTGADD VRVMTRKSVD DPGRPPGIVL SAATSFWLPV PPKRVFDFLR  600
DENSRNEWDI LSNGGVVQEM AHIANGRDTG NCVSLLRVNS ANSSQSNMLI LQESCTDSTG  660
SFVIYAPVDI VAMNVVLNGG DPDYVALLPS GFAILPDGTT VHGSGIGETA PGGSLLTVAF  720
QILVDSVPTA KLSLGSVATV NNLIACTVER IKASLSGESA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein