PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027345942.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 295aa MW: 31417.8 Da PI: 7.1369 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36.9 | 8.2e-12 | 11 | 55 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W++e d+ + +a + ++ + +W++Ia+ ++ g+tl+++k ++ XP_027345942.1 11 EWSKEQDKAFENALAIHPEDasdRWEKIAADVP-GKTLEEIKRHYE 55 7********************************.**********95 PP | |||||||
2 | Myb_DNA-binding | 42 | 2.1e-13 | 122 | 166 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++I+r + +Rt+ q+ s+ qky XP_027345942.1 122 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 166 6*******************************************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 295 aa Download sequence |
MTVDEVGSSS EWSKEQDKAF ENALAIHPED ASDRWEKIAA DVPGKTLEEI KRHYELLVED 60 VNQIESGCVP LPLYNSSSEG STSHASDEGA GKKGGHQWNG NSESNHGTKA SKSDQERRKG 120 IAWTEDEHRL FLLGLDKYGK GDWRSISRNF VVTRTPTQVA SHAQKYFIRL NSMNKDRRRS 180 SIHDITSVNN GDISAPQGPI TGQTNGSAAN SAGKSTKPSP PTPTATPGVG IYAAPTIGQP 240 IGGPLVSAVG TPVNLPTSAH MAYGLGAPVP GTVVPGAPMN LAPVPYPMPH TSAHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G08520.1 | 1e-117 | MYB family protein |