PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027345942.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 295aa    MW: 31417.8 Da    PI: 7.1369
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027345942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.98.2e-121155345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      W++e d+ + +a + ++ +   +W++Ia+ ++ g+tl+++k ++ 
   XP_027345942.1 11 EWSKEQDKAFENALAIHPEDasdRWEKIAADVP-GKTLEEIKRHYE 55
                     7********************************.**********95 PP

2Myb_DNA-binding422.1e-13122166347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ l++ +  ++G+g+W++I+r +  +Rt+ q+ s+ qky
   XP_027345942.1 122 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 166
                      6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MTVDEVGSSS EWSKEQDKAF ENALAIHPED ASDRWEKIAA DVPGKTLEEI KRHYELLVED  60
VNQIESGCVP LPLYNSSSEG STSHASDEGA GKKGGHQWNG NSESNHGTKA SKSDQERRKG  120
IAWTEDEHRL FLLGLDKYGK GDWRSISRNF VVTRTPTQVA SHAQKYFIRL NSMNKDRRRS  180
SIHDITSVNN GDISAPQGPI TGQTNGSAAN SAGKSTKPSP PTPTATPGVG IYAAPTIGQP  240
IGGPLVSAVG TPVNLPTSAH MAYGLGAPVP GTVVPGAPMN LAPVPYPMPH TSAHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-117MYB family protein