PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027345779.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 794aa    MW: 88031.2 Da    PI: 6.7493
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027345779.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.94.6e-24164265199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae++      + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L +gD v+F   + ++
  XP_027345779.1 164 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFL--RGEN 255
                     99****************************963.3445679************************************************..4499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+++++r+
  XP_027345779.1 256 GELRLGIRRA 265
                     999****996 PP
2Auxin_resp117.61e-38290372182
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsL 82 
                     +a+a+stks+F+v+Y+Pras+++Fvv+++k++k++k+++++G+Rfkm+fe+++s+err+  Gt +g+sdldp+rWp+SkWr+L
  XP_027345779.1 290 VANAISTKSMFHVFYSPRASHADFVVPYKKYVKSIKNPMTIGTRFKMRFEMDESQERRCsGGTLIGTSDLDPYRWPKSKWRCL 372
                     689********************************************************889********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 794 aa     Download sequence    
MEIDLNHEVT EVEKNAFCDR ECEKGACVRC WSSSTCSSSS SSSALVSSSY LELWHACAGP  60
LTSLPKKGNV VVYFPQGHLE QVASFSPFTP LEIPTYDLQP QIFCRVVNVQ LLANKENDEV  120
YTQVTLLPQS ELSGMNSEGK EVEEMGAEEE SDERSPTKST PHMFCKTLTA SDTSTHGGFS  180
VPRRAAEDCF PPLDYKQQRP SQELVAKDLH GVEWKFRHIY RGQPRRHLLT TGWSIFVSQK  240
NLVSGDAVLF LRGENGELRL GIRRAVRPRN GLPESIIGSQ NCYPNFLSSV ANAISTKSMF  300
HVFYSPRASH ADFVVPYKKY VKSIKNPMTI GTRFKMRFEM DESQERRCSG GTLIGTSDLD  360
PYRWPKSKWR CLMVRWDEDI ETNHQDRVSP WEIDLSAPLP PLSIQSSPRL KKLRTGLQAA  420
SQSHLITGGS GLVGFEESVR SPKVLQGQEN AGFVSLYYGC DTVTNRPGFE MSSPSHPNLA  480
SAGVRKVPSS ELSSVHPFSY AGFMETNRFP RVLQGQEMCP LKSLTGKVDL NLGAWGKPNL  540
SCTTFNLHQA TKPNFQSPYF PYGDIHQTGQ ASLFCSKSTS FQRENVPYNS PSTKAGIIIN  600
EVGRSDLPNE HKLQDNISAA AASLGAASMA IPNDNNVQGK VNACKLFGFP LSGETTNQNS  660
QNSAKRSCTK VHKQGSLVGR AIDLSRLSGY NDLLSELERL FGMEGLLKDP DKGWRILYTD  720
SENDIMVVGD DPWHEFCDVV SKIHIYTQEE VEKMTIGMIS DDTNSCLEQA PVIMEASKSS  780
SVGQPDYSPT AVRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60450.10.0ARF family protein