PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027345489.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 706aa    MW: 79548.2 Da    PI: 5.4643
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027345489.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS371.11.5e-1133297031373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl cA+av ++d++ a++lL++++ +a p+gd+ qRla yf+++L+arl++ +++    +++ ++++ +++e l+a+++f  ++ + kf++
  XP_027345489.1 329 LRNLLLMCAQAVYANDNRTANELLNQIRRHALPNGDASQRLAYYFAKGLEARLVGDGTGAQGMFSSLSSKRITVAELLKAHQTFLSACSFKKFTY 423
                     689****************************************************999999999999999999********************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN++I++ +++ee++HiiDf+i +G+QWp L++ L++R++gpp+lRiTg++ p++g   +e++eetg+rLa+++++ +vpf++++l+++++e+
  XP_027345489.1 424 FFANKMIMKTAAKEETLHIIDFGILYGFQWPILIKFLSDREGGPPKLRITGIEFPQPGfrPSEMIEETGRRLANYCQRYNVPFQYHPLASRNWET 518
                     *********************************************************9*9****************************999**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L+++++E++aVn+ ++ ++llde+ +++s+r++vL+l+++++P +++++  + ++n++ F++rf eal ++s+++d+ ++ +pr +e r+
  XP_027345489.1 519 IQVEDLKIESNEVVAVNCLMRFENLLDETIEVNSPRNAVLHLIRKINPAIFTHSIVNGSYNAPFFATRFREALFHFSTIYDMCDTVIPRGNEMRM 613
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     ++Ere+lgre++nv+aceg++r+er et+++W+ r ++aGFk++pl+e+ +++ ++ l++ + + +  +++++++++gWk+r L++ ++W
  XP_027345489.1 614 MIEREILGREAMNVIACEGSQRVERPETYKQWQVRNTRAGFKQLPLNEELMAKFRTKLKEWYHKDFVFDQDQNWMLQGWKGRILYASTCW 703
                     **************************************************************888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 706 aa     Download sequence    
MDANFPEASD IYHFGEDGSI LASDPSQYPT DWYVSESLAF ATTDPSSVAG TDPSLEDNDF  60
SETAKFIGQI LMEENVEQRP FYDSLSLQVT EKSFYDALTD NASLSPNQHP LVLSPEGGTS  120
SSSSNSNSNS NNSGNNFSYE NSHLLKPPSP DSPVSIPVFQ FNSHVVSQSP PPSLSVNDGL  180
LHLDSSITKL LAQNIFSDVD SVSQFKRGLE EASKFLPPGP KLVTGLEPKG GSSDVVEDSI  240
GLRSRKNHER EESDFRQEGR SSKHSALSVE DESDLSDAFD RLFVNVGNVC TENYYLQRET  300
VNAEQRGEKG EGGKGRPKKQ GGKKETVDLR NLLLMCAQAV YANDNRTANE LLNQIRRHAL  360
PNGDASQRLA YYFAKGLEAR LVGDGTGAQG MFSSLSSKRI TVAELLKAHQ TFLSACSFKK  420
FTYFFANKMI MKTAAKEETL HIIDFGILYG FQWPILIKFL SDREGGPPKL RITGIEFPQP  480
GFRPSEMIEE TGRRLANYCQ RYNVPFQYHP LASRNWETIQ VEDLKIESNE VVAVNCLMRF  540
ENLLDETIEV NSPRNAVLHL IRKINPAIFT HSIVNGSYNA PFFATRFREA LFHFSTIYDM  600
CDTVIPRGNE MRMMIEREIL GREAMNVIAC EGSQRVERPE TYKQWQVRNT RAGFKQLPLN  660
EELMAKFRTK LKEWYHKDFV FDQDQNWMLQ GWKGRILYAS TCWVPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein