PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027344483.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CO-like

Protein Properties

Length: 376aa MW: 41556.4 Da PI: 4.8816

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027344483.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.6	3.8e-06	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 +C+ +++++ +C+++ +lC +C + H+ H++ XP_027344483.1 4 ICDFCGDQRSMVYCRSDAACLCLSCDRNVHSAnalsrrHSR 44 7*****************************65677777766 PP
2	zf-B_box	18.4	4.4e-06	46	87	4	39
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39 C++++++++ C + + lC++C H g H++ XP_027344483.1 46 LLCERCNSQPAFVRCAEEKISLCQNCDWLVH-GtsassstHKR 87 57************************99888.44677777776 PP
3	CCT	64	4.4e-22	319	362	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a++RYkeK+ktRkF+Kk+rY+sRKa+A+ R RvKGrFvk+ XP_027344483.1 319 RSNAVMRYKEKKKTRKFDKKVRYASRKARADVRRRVKGRFVKAG 362 899**************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MGYICDFCGD QRSMVYCRSD AACLCLSCDR NVHSANALSR RHSRTLLCER CNSQPAFVRC 60 AEEKISLCQN CDWLVHGTSA SSSTHKRQAI NCYSGCPSAV ELSSIWSFVL DIPHMSESTC 120 EQELGLMSIN ENNNKSGWVP PENQDLSDSD QVTDLPALDK SLVCPSSMPE SSLEPRIRCP 180 ATKCPALCED ENLYDDFNMD EVDLNLENYE ELFGVALSHS EELFENGGID SLFGTKDMSA 240 GDSNSCSNAA SADSILSTKT EPILCFTGKQ AQSNLSFSGI TGESSAGDYQ DCGASSMLLM 300 GEPPWLTPCP ENSLQSANRS NAVMRYKEKK KTRKFDKKVR YASRKARADV RRRVKGRFVK 360 AGDVYDYDPL STTRSY

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MGYICDFCGD QRSMVYCRSD AACLCLSCDR NVHSANALSR RHSRTLLCER CNSQPAFVRC  60
AEEKISLCQN CDWLVHGTSA SSSTHKRQAI NCYSGCPSAV ELSSIWSFVL DIPHMSESTC  120
EQELGLMSIN ENNNKSGWVP PENQDLSDSD QVTDLPALDK SLVCPSSMPE SSLEPRIRCP  180
ATKCPALCED ENLYDDFNMD EVDLNLENYE ELFGVALSHS EELFENGGID SLFGTKDMSA  240
GDSNSCSNAA SADSILSTKT EPILCFTGKQ AQSNLSFSGI TGESSAGDYQ DCGASSMLLM  300
GEPPWLTPCP ENSLQSANRS NAVMRYKEKK KTRKFDKKVR YASRKARADV RRRVKGRFVK  360
AGDVYDYDPL STTRSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07650.2	1e-133	CO-like family protein