PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027344061.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 452aa    MW: 50739.4 Da    PI: 6.0117
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027344061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS295.71.2e-90424362373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilkfs 94 
                     ++lLl+cA a++s+d +laq++++ l++ asp gd++qRl++ f++AL +r +r +++ ++   +++     + + +++++l  ++++ P+++f+
  XP_027344061.1  42 EKLLLHCASALESNDITLAQQVMWVLNNVASPVGDTNQRLTSWFLRALISRASRICPTAMSFKGSNTI----QRRLMTVTELagYVDLIPWHRFG 132
                     689***************************************************77766643333332....233333333355*********** PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl..... 181
                     + + N+ I +a+ g +rvHi+Df+i++++QWp++++aLa+RpegppslRiT+ +   ++    + +++e+g rL +fA+  +vpfefnv+     
  XP_027344061.1 133 FCASNNEIFKAIMGFQRVHILDFSITHCMQWPTFIDALAKRPEGPPSLRITVPSCRPPVpplVNISMHEVGLRLGNFAKFRDVPFEFNVIgntgp 227
                     ***************************************************977765667799******************************** PP

            GRAS 182 ................vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles...erdevLklvkslsPkvvvvveqeadhnsesFlerf 257
                                      ++ l+ l++ +L+++++Eal++n++  l +l d++  +++    rd++L+lvk+l+P++v +v++++d++++s+  r+
  XP_027344061.1 228 ltstefsneietsslnFESMLSLLNPTMLNLREDEALVINCQNWLRYLSDDRKGSSQnlsLRDAFLNLVKGLNPQIVLLVDEDCDLSASSLTSRI 322
                     *****9999998888767788999************************9987665555779********************************** PP

            GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve 352
                     + ++++ +  fd+le+ lp++s +r+  E   +g++i+n+++ eg +r+er e+ ++ ++r++++G+ +vp+ ++++k++k+ll +++  g+ ++
  XP_027344061.1 323 TTCFNHLWIPFDALETFLPKDSCQRTEFECD-IGQKIENIISFEGHQRIERLESGMQMSQRMKNVGYFNVPFCDETVKEVKALLDEHA-SGWGMK 415
                     *******************************.********************************************************.88999* PP

            GRAS 353 eesgslvlgWkdrpLvsvSaW 373
                      e++ lvl+Wk+++ v+++aW
  XP_027344061.1 416 REENMLVLTWKGNSCVFATAW 436
                     ********************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    
MKAELKGTSI SFQNPPLFNT PHSPLSGALK GCLGSLDGAC IEKLLLHCAS ALESNDITLA  60
QQVMWVLNNV ASPVGDTNQR LTSWFLRALI SRASRICPTA MSFKGSNTIQ RRLMTVTELA  120
GYVDLIPWHR FGFCASNNEI FKAIMGFQRV HILDFSITHC MQWPTFIDAL AKRPEGPPSL  180
RITVPSCRPP VPPLVNISMH EVGLRLGNFA KFRDVPFEFN VIGNTGPLTS TEFSNEIETS  240
SLNFESMLSL LNPTMLNLRE DEALVINCQN WLRYLSDDRK GSSQNLSLRD AFLNLVKGLN  300
PQIVLLVDED CDLSASSLTS RITTCFNHLW IPFDALETFL PKDSCQRTEF ECDIGQKIEN  360
IISFEGHQRI ERLESGMQMS QRMKNVGYFN VPFCDETVKE VKALLDEHAS GWGMKREENM  420
LVLTWKGNSC VFATAWVPCE MRDHVGMDVS MS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-119GRAS family protein