PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343988.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CO-like

Protein Properties

Length: 431aa MW: 47545.9 Da PI: 5.1652

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343988.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.8	6.8e-06	2	44	3	39
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 e+ C+ ++ ++ +C++++ +lC +C + H+ H++ XP_027343988.1 2 EPLCEFCGIVRAVVYCKSDSACLCLQCDDCVHSAnslsrrHSR 44 689****99*******************55667777765 PP
2	zf-B_box	17.4	9.1e-06	46	74	4	32
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClle 32 C++++++++ + C d + lC+ C l+ XP_027343988.1 46 LLCDKCNSQPAMFRCMDHKLSLCQGCDLN 74 68************************976 PP
3	CCT	62.7	1.2e-21	375	418	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R++a++RY+eK+ktR F K+irY+sRKa+A++R+RvKGrFvk+ XP_027343988.1 375 RDKAKMRYNEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAG 418 899**************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MEPLCEFCGI VRAVVYCKSD SACLCLQCDD CVHSANSLSR RHSRSLLCDK CNSQPAMFRC 60 MDHKLSLCQG CDLNPNNCAV LGHRRLALNC XTGCPSLAEF SRIWSFAFDV NGSFGGWESH 120 STLPKSDSCT SKRLEQPDHN GGSFGSLVSD KLDEMEPCVR YEPWMEQPST IPSNPCYTPY 180 CKDQTFFFPE DSNQPKLQGC ANFNDLGIHD GNDLCDGLNV DNVQLNFESA DDIFGSSQVA 240 TRFNLEDGGM DCLLMDRTIS VTESNRFIES AMEASSSSVQ QDCVTFQSST AGGSASVMQT 300 ISSNANCALL NPSSNRSIDL GFPQGQVHSN IPLQLPNITG ESSANEYQDC GLSPVFLPGE 360 SPWESNLEGT CPLARDKAKM RYNEKKKTRT FGKQIRYASR KARADTRKRV KGRFVKAGEA 420 YDYDPLVTRD V

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MEPLCEFCGI VRAVVYCKSD SACLCLQCDD CVHSANSLSR RHSRSLLCDK CNSQPAMFRC  60
MDHKLSLCQG CDLNPNNCAV LGHRRLALNC XTGCPSLAEF SRIWSFAFDV NGSFGGWESH  120
STLPKSDSCT SKRLEQPDHN GGSFGSLVSD KLDEMEPCVR YEPWMEQPST IPSNPCYTPY  180
CKDQTFFFPE DSNQPKLQGC ANFNDLGIHD GNDLCDGLNV DNVQLNFESA DDIFGSSQVA  240
TRFNLEDGGM DCLLMDRTIS VTESNRFIES AMEASSSSVQ QDCVTFQSST AGGSASVMQT  300
ISSNANCALL NPSSNRSIDL GFPQGQVHSN IPLQLPNITG ESSANEYQDC GLSPVFLPGE  360
SPWESNLEGT CPLARDKAKM RYNEKKKTRT FGKQIRYASR KARADTRKRV KGRFVKAGEA  420
YDYDPLVTRD V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21880.1	4e-89	CO-like family protein