PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027343938.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | bHLH | ||||||||
Protein Properties | Length: 242aa MW: 26900.9 Da PI: 8.4845 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.2 | 1.4e-13 | 56 | 102 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +++Lr+++P a Kl+Ka+ L ++++++k+L XP_027343938.1 56 KNHSEAERRRRARINAHLDTLRSVIPGA-----NKLDKASLLAEVIRHLKEL 102 58*************************8.....6****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MEMEAFAFPV SSGVIGSGYT SSSSLILDKE KGELVEAPVK LERKVVSPER SIEALKNHSE 60 AERRRRARIN AHLDTLRSVI PGANKLDKAS LLAEVIRHLK ELKTNAAKAS EGLMIPKDND 120 EIRVEEQEGG LNGFPYSIRA SLCCEYKPGL LSDIRQALDA LHLMIIRAEI ATLGGRMNNV 180 FVIISCKEQK FEDAESRQFL AGSVHQALRS VLDRFSVSQD MLESRKRRRV SIFSSSSLGD 240 FL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 225 | 229 | RKRRR |
2 | 226 | 230 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 2e-32 | bHLH family protein |