PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027343912.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 259aa MW: 28780.3 Da PI: 7.7249 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.6 | 0.0002 | 92 | 114 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H XP_027343912.1 92 FSCNYCQRKFYSSQALGGHQNAH 114 89*****************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MDLLWSEAQP RPSEKLIVAF SETPPCSKRE KEDEKHPHES APRLLLDLSL PSEDSGDDSK 60 PELNLINCFD TNVSMNSSES SNHGNEVEPK IFSCNYCQRK FYSSQALGGH QNAHKRERTL 120 AKRGHKVGGA VSIDFGQRYS SMASLPLHGS YNRSLGIQVH SMINKPSYQT PIFGLSHSHA 180 QKGWQRHPMY SKAAIESLAS ENFHVETETE SSLAGGIQRL GKPSPRLVPE GFGGYLLGSI 240 SHLKTKQEEL QKLDLSLKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10970.1 | 2e-40 | C2H2 family protein |