PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343900.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 773aa    MW: 85724.3 Da    PI: 6.5902
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.81.8e-181674357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++ +++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_027343900.1 16 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 74
                    5679*****************************************************97 PP
2START155.25.3e-4911830424205
                     EEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXXTTXX-SSX.EEEEEEEEE CS
           START  24 ssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvaelqalsplvp.RdfvfvRyi 115
                       ++++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++l+v+ ++  g+++l +++l+a+++l+p Rdf+ +Ry+
  XP_027343900.1 118 QHTQNPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDRPSWFRDCRAVDVLNVLPTAngGTIELLYMQLYAPTTLAPaRDFWLLRYT 211
                     457899******************************.8888888888****************9999**************************** PP

                     EE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
           START 116 rqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205
                       l++g++vi+++S+ ++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l++s+++ ++kt++ +l+++++
  XP_027343900.1 212 SVLEDGSLVICERSLKNTQNGPSmppVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMVALRQLRQ 304
                     *********************9988899**********************************************************9999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 773 aa     Download sequence    
MAMSCKDGKQ GLDNGKYVRY TPEQVEALER LYHDCPKPSS IRRQQLIREC PILSNIEPKQ  60
IKVWFQNRRC REKQRKEASR LQAVNRKLTA MNKLLMEEND RLQKQVSQLV YENGYFRQHT  120
QNPGPDSIGI VAISHGCTGV AARACGLVGL EPTRVAEILK DRPSWFRDCR AVDVLNVLPT  180
ANGGTIELLY MQLYAPTTLA PARDFWLLRY TSVLEDGSLV ICERSLKNTQ NGPSMPPVQH  240
FVRAEMLPSG YLIRPCEGGG SIIHIVDHMD LEPWSVPEVL RPLYESSTVL AQKTTMVALR  300
QLRQISHEVS QSNVTGWGRR PAALRALCQK LSRGFNEAIN GFTDEGWSVM GNDGVDDVTV  360
LVNSSPDKLM GLNLSFANGF PSVSNTVLCA KASMLLQNVP PAILLRFLRE HRSEWADNNM  420
DAYSAAAIKV GPCSLSGSRV GNFGGQVIHP LAHTIEHEEF LEVIKLEGIA NSPEETIMPR  480
EMFLLQLCSG MDENAVGTCA ELIFAPIDAS FADDAPLLPS GFRIIPLDSG KEASNPNRTL  540
DLASALDIGP AGNRTSNDYS GNSGCMRSVM TIAFEFAFES HMQEHVATMA RQYVRSIISS  600
VQRVALALSP SHLSSQAGLR TPLGTPEAQT LARWICNSYR CYLGVELLKS NNEGNESLLK  660
SLWHHSDAIL CCTLKALPVF TFANQAGLDM LETTLVALQD ITLEKIFDDH GRKILCSEFP  720
QIIQQGFACL QGGICLSSMG RPISYERVVA WKVLNEEENA HCISFMFMNW SFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein