PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343897.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 837aa    MW: 92430.8 Da    PI: 6.4633
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.72e-181674357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++ +++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_027343897.1 16 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 74
                    5679*****************************************************97 PP
2START178.44.1e-561603682205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++l+v+ ++  g+++l 
  XP_027343897.1 160 IAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPT-RVAEILKDRPSWFRDCRAVDVLNVLPTAngGTIELL 253
                     7899******************************************************.8888888888****************9999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l++g++vi+++S+ ++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_027343897.1 254 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVICERSLKNTQNGPSmppVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 348
                     *******************************************9988899********************************************* PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+++ ++kt++ +l+++++
  XP_027343897.1 349 ESSTVLAQKTTMVALRQLRQ 368
                     *************9999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 837 aa     Download sequence    
MAMSCKDGKQ GLDNGKYVRY TPEQVEALER LYHDCPKPSS IRRQQLIREC PILSNIEPKQ  60
IKVWFQNRRC REKQRKEASR LQAVNRKLTA MNKLLMEEND RLQKQVSQLV YENGYFRQHT  120
QNTTLATKDT SCESAVTSGQ RSLTTQHPPR DASPAGLMSI AEETLAEFLS KATGTAVEWV  180
QMPGMKPGPD SIGIVAISHG CTGVAARACG LVGLEPTRVA EILKDRPSWF RDCRAVDVLN  240
VLPTANGGTI ELLYMQLYAP TTLAPARDFW LLRYTSVLED GSLVICERSL KNTQNGPSMP  300
PVQHFVRAEM LPSGYLIRPC EGGGSIIHIV DHMDLEPWSV PEVLRPLYES STVLAQKTTM  360
VALRQLRQIS HEVSQSNVTG WGRRPAALRA LCQKLSRGFN EAINGFTDEG WSVMGNDGVD  420
DVTVLVNSSP DKLMGLNLSF ANGFPSVSNT VLCAKASMLL QNVPPAILLR FLREHRSEWA  480
DNNMDAYSAA AIKVGPCSLS GSRVGNFGGQ VIHPLAHTIE HEEFLEVIKL EGIANSPEET  540
IMPREMFLLQ LCSGMDENAV GTCAELIFAP IDASFADDAP LLPSGFRIIP LDSGKEASNP  600
NRTLDLASAL DIGPAGNRTS NDYSGNSGCM RSVMTIAFEF AFESHMQEHV ATMARQYVRS  660
IISSVQRVAL ALSPSHLSSQ AGLRTPLGTP EAQTLARWIC NSYRCYLGVE LLKSNNEGNE  720
SLLKSLWHHS DAILCCTLKA LPVFTFANQA GLDMLETTLV ALQDITLEKI FDDHGRKILC  780
SEFPQIIQQG FACLQGGICL SSMGRPISYE RVVAWKVLNE EENAHCISFM FMNWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein