PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343735.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 547aa    MW: 61654.7 Da    PI: 4.9794
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343735.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS446.51.7e-1361775471374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+e L++cA+a++++d+e ++ l+++l++++s +g+pmqRl ay++eAL ar+a+s+s++yk+l++se +     e l+++++++e++P++kf++
  XP_027343735.1 177 LKEMLYTCAKAMAANDMETTEGLMSELRKMVSISGNPMQRLGAYILEALVARMASSGSTIYKSLKCSEPT---GNELLSYMHVLYEICPYFKFGY 268
                     5789*****************************************************************9...99******************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI ea+++e++vHi+Df+isqG+QW++L+qaLa Rp+gpp++RiTgv+++ s   +   l  +g+rL+ +A++++vpfefn+ v    ++
  XP_027343735.1 269 MSANGAIAEAMKEESEVHIVDFQISQGTQWVSLIQALARRPGGPPKIRITGVDDNVSAyaRGGGLDIVGKRLSTLAQSCHVPFEFNA-VRVPASQ 362
                     ******************************************************988899999************************.7999*** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le+L+++p Ea+aVn++++lh+++desv+++++rd++L+l k lsPkvv++veqe ++n+++Fl+rf+e+++yy a+f+s++  lpre++eri
  XP_027343735.1 363 VQLEDLELRPYEAVAVNFAIMLHHVPDESVNSHNHRDRLLRLAKYLSPKVVTLVEQEFNTNNAPFLQRFIETMNYYLAVFESIDIVLPREHKERI 457
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +vE+++l+re+vn++acegaer+erhe l+kWr+r+++aGF+p+pls+++++++k ll+++ ++ y++ee++g+l+lgW+d+ L++ +aWr
  XP_027343735.1 458 NVEQHCLAREVVNLIACEGAERVERHELLNKWRMRFTMAGFTPYPLSSFINSSIKELLENYRGH-YTLEERDGALYLGWMDKVLIASCAWR 547
                     **************************************************************77.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    
MQTSQKHEIS YGSGGFYVEP DQNLGSYCLP SSENLDNYSS SDNSSQTTYP SVQTLEQYCT  60
IESASTSNSF PYQNSPSAVS FSPNNSPVSK LDSKSYVSRP QHSLEIVNDS PEDDSYLTHD  120
LDDLRHKIRE LETAMLGTNA DMLGTYDETV MPGESDPFLL EAEKWKKMME VISRGDLKEM  180
LYTCAKAMAA NDMETTEGLM SELRKMVSIS GNPMQRLGAY ILEALVARMA SSGSTIYKSL  240
KCSEPTGNEL LSYMHVLYEI CPYFKFGYMS ANGAIAEAMK EESEVHIVDF QISQGTQWVS  300
LIQALARRPG GPPKIRITGV DDNVSAYARG GGLDIVGKRL STLAQSCHVP FEFNAVRVPA  360
SQVQLEDLEL RPYEAVAVNF AIMLHHVPDE SVNSHNHRDR LLRLAKYLSP KVVTLVEQEF  420
NTNNAPFLQR FIETMNYYLA VFESIDIVLP REHKERINVE QHCLAREVVN LIACEGAERV  480
ERHELLNKWR MRFTMAGFTP YPLSSFINSS IKELLENYRG HYTLEERDGA LYLGWMDKVL  540
IASCAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein