PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027343626.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | LBD | ||||||||
Protein Properties | Length: 197aa MW: 21662.5 Da PI: 5.6649 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 135.6 | 1.9e-42 | 32 | 131 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+Ca++Cvlapyfp ++p+kf +h++FGasn++k+l++lpe++r da++s+vyeA ar+rdPvyG++g i +lq+q+++l+a+la XP_027343626.1 32 PCAACKILRRRCAEKCVLAPYFPPTEPAKFTTAHRVFGASNIIKFLQELPESQRADAVASMVYEAGARIRDPVYGCAGAICQLQKQVNELQAQLA 126 7********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_027343626.1 127 KAQAE 131 *9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MESDSNTPTS SPTFSHSSNS PSSSPPQVVM SPCAACKILR RRCAEKCVLA PYFPPTEPAK 60 FTTAHRVFGA SNIIKFLQEL PESQRADAVA SMVYEAGARI RDPVYGCAGA ICQLQKQVNE 120 LQAQLAKAQA ELVNMQFQQA NLVTLICMEM AQTPQESPQQ SVNNFISSPS HSTGYQNNLN 180 FLEDTTNLNS MWEPLWT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 4e-72 | LBD family protein |