PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027343582.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 254aa MW: 27983.5 Da PI: 7.1646 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.3 | 1.3e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+++ k++G+g +W + +++ g++R++k+c++rw++yl XP_027343582.1 14 RGPWSPEEDATLKNYLKKHGTGgNWIALPKKAGLRRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 42.9 | 1.1e-13 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd+ + + + G++ W+ Ia+ ++ gRt++++k++w++ XP_027343582.1 69 GGFTEEEDQVICTLYATIGSR-WSVIAAQLP-GRTDNDVKNHWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MGRAPCCDKA NVKRGPWSPE EDATLKNYLK KHGTGGNWIA LPKKAGLRRC GKSCRLRWLN 60 YLRPHIKHGG FTEEEDQVIC TLYATIGSRW SVIAAQLPGR TDNDVKNHWN TKLKKKFLAP 120 NTNAPGNTGC PQFLTSSTPQ SQVEHFVFDH ENSVKSHVLG LEQTPITAPL PLPLEPDASV 180 LGSGCKVPLA EEVSLLSNSA SFAKVNSGTQ WFGCYDHEGE DEAILLDYVY EDLLRNGFVS 240 QDNSMCNQVG PSSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65790.1 | 1e-74 | MYB family protein |