PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027343493.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 495aa MW: 54737.4 Da PI: 5.4784 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.3 | 6.6e-17 | 35 | 82 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed lv++vk++G g+W+++ + g+ R++k+c++rw ++l XP_027343493.1 35 KGPWTPAEDAVLVEYVKKYGEGNWNSVQKNSGLLRCGKSCRLRWANHL 82 79******************************99**********9986 PP | |||||||
2 | Myb_DNA-binding | 50.2 | 5.8e-16 | 88 | 131 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+++ eE++++vd++++lG++ W++ a+ ++ gRt++++k++w++ XP_027343493.1 88 KGAFSHEEEQIIVDLHAKLGNK-WARMAAQLP-GRTDNEIKNFWNT 131 799*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 495 aa Download sequence |
MARTISNNSN NDEAVTEVDT NGSKDESEAR GHLKKGPWTP AEDAVLVEYV KKYGEGNWNS 60 VQKNSGLLRC GKSCRLRWAN HLRPNLKKGA FSHEEEQIIV DLHAKLGNKW ARMAAQLPGR 120 TDNEIKNFWN TRMKRRQRAG LPLYPPEVHA EATAYHLQQQ QHYLEQQPYP SNSSSSFSLL 180 LSSCYPKKLN EPNQNHYSNA NPMQNQPDSA NCYTNPSQKF KFSNENRANV NLALPLSPVS 240 PYRSSSSTLF NQSFAPPSCS AATDSRDYQS YGDHGFIAGS PYDPIPLVPS STTEISSSQT 300 ATPASSYASG VVDGLMGPSS MVNNDYYEVA PLSPQGNSGL LDALVMEAHG LSRNDKFNGE 360 DSILAEKLSH KRKSMAGDQE YVEVGGTEPV VSTMKKSNGN TSNEAQRNDF SSSELSKGEK 420 LIGEDPLEEL NSMDDDLFSL LNHFPSEMPM PEWYRKEESQ SLGLETQPDA SSPGPTNQEF 480 AWTLGTCWKN MPGIC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06100.1 | 5e-73 | MYB family protein |