PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027343375.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 330aa MW: 37391.9 Da PI: 7.0994 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.6 | 2.6e-17 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl XP_027343375.1 14 RGPWSPEEDSKLKEYIEKHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 39.2 | 1.6e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ eEd ++ + + G++ W+ Ia+ ++ gRt++++k++w++ XP_027343375.1 69 GEFSDEEDRIICSLYANIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MGRAPCCDKA NVKRGPWSPE EDSKLKEYIE KHGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDEEDRIIC SLYANIGSRW SIIAAQLPGR TDNDIKNYWN TKLKRKLMGL 120 LPSAHQRLPP YQSSPQNTPS FPPHSLSSSI YRDYYNNSYH TTPAQATTSS FTCLEPISIP 180 SSNYTSTSCT TTSISLPFYQ NQESLVSVIS PMQYYPITDS PMLVFGSEGS CSSSDGSCSQ 240 VSHGREIKQE EMGLQNFMYE DQHMNKIMLS QGQEGMNQWA EKANGCYFQT QTALDYELEV 300 IKQMISSNSN NGYLSIDENK TEEKGMYYNW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 8e-78 | MYB family protein |