PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027343253.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | ARR-B | ||||||||
Protein Properties | Length: 478aa MW: 53593.1 Da PI: 6.5558 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.3 | 1.5e-27 | 194 | 248 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +prl+Wt++LH++F+++v+qL G++kA+Pk+ilelm+++ Lt+e+v+SHLQkYRl+ XP_027343253.1 194 RPRLVWTSTLHNHFIDVVNQL-GADKAVPKRILELMNIPNLTRENVASHLQKYRLH 248 59*******************.9*******************************97 PP | |||||||
2 | Myb_DNA-binding | 38 | 3.7e-12 | 196 | 246 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT ++ ++d+v+qlG + +k+I + m+ ++t++++ s++qky+ XP_027343253.1 196 RLVWTSTLHNHFIDVVNQLGADkaVPKRILELMNiPNLTRENVASHLQKYR 246 789***********************************************7 PP | |||||||
3 | Response_reg | 53.8 | 1.1e-18 | 26 | 124 | 7 | 109 |
SHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEE CS Response_reg 7 eplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdfls 99 + +v+e ++q++ + +++d++ al+l++e++ +D+il+D+ mp+md +e+l++ + ++p+i++++ ++ + l+ ++ Ga df + XP_027343253.1 26 DIDVLESIKQVCI-----DFITCSDSSLALNLVHERKgcFDIILIDVHMPNMDSYEFLRHVCQDI-DVPVIMMSDDNDASAKLKSINDGACDFWT 114 5555555555554.....2247899999******9999***********************9877.9**************************** PP SS--HHHHHH CS Response_reg 100 Kpfdpeelvk 109 Kp pe++++ XP_027343253.1 115 KPLRPEQIRD 124 *******987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 478 aa Download sequence |
MANSSNGDVT SSTLQAGLRI LAIDHDIDVL ESIKQVCIDF ITCSDSSLAL NLVHERKGCF 60 DIILIDVHMP NMDSYEFLRH VCQDIDVPVI MMSDDNDASA KLKSINDGAC DFWTKPLRPE 120 QIRDIWLHVA KKVLNDKKKQ DNLGSLDNNN GQNQRNGDSE VNSSVINATE GVQRNSNSNE 180 ADESENNYQP PRRRPRLVWT STLHNHFIDV VNQLGADKAV PKRILELMNI PNLTRENVAS 240 HLQKYRLHLK RKNEVTQQQN EMSVPNTVPS STETNAEVPR ETPMPNSVRS STETNADDFQ 300 ALAAAVNLPY ETLLNLPPNM MPVEAQNALR RWSNQSNIAY AHAPLNIARP LDHDSTTWPP 360 SNTIDNLVGN FDTLLQDQRQ RNQLSLLHHR VHIQPPPMTV SRSPAIHNCN FERNTLILSH 420 QPQPSSSLGG VQGAENSIFY DCVVTTDTLP SISHRRRNAI LTRGAMRCFP TIRSPGSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 3e-57 | ARR-B family protein |