PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343087.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family M-type_MADS
Protein Properties Length: 325aa    MW: 36817.6 Da    PI: 6.3129
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343087.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF41.71.5e-13951143
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                    kri+ +  r+ tf +R++g++KK +E +++C+ae++ i++  +
  XP_027343087.1  9 KRISKEGLRKSTFKQRKKGLMKKISEFCTMCGAEACFIVYDDN 51
                    7999***********************************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MGRARTTLKR ISKEGLRKST FKQRKKGLMK KISEFCTMCG AEACFIVYDD NNGNVEPMTW  60
PEDPTVVHSM IEKYESQKNE KPPKTFNIED FFENRKNMLE AEISRVKKEI TKTKYPTKDQ  120
SFSNLGEEQL KAFIDILDAK IGACDRRISL LKNMHESEVM QNMAQKGATS SHPSQLNLVQ  180
NINQSQLIPT PMRQLNDTNG MTNFTNSTIQ VHGACFHRTN MLANLQQSDA CFSFMPNMAQ  240
ESVPSSLGSQ LNCMQNISTS QHNLETLKPL DSTNKLGESS TDFANQLGEF QHCVDEPIEI  300
DDWFNQLGGG DLESVLQNIH FQSQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.12e-20M-type_MADS family protein