PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343066.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 442aa    MW: 50399.4 Da    PI: 6.6937
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343066.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS382.74.5e-117234382373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL++cA++v+sg+ ++a+  L+ +s+++spdg++++R+++yf eAL  r+ ++ +++yk+l +s+ts   sse + ++k+f+e++P+lkfs++
  XP_027343066.1  23 ISLLIDCAKCVASGSIKNADIGLEYISQISSPDGNAVERMVTYFSEALGYRIIKHLPGVYKSLYSSKTS--LSSEDILVQKYFYELCPFLKFSYM 115
                     579************************************************************999997..69********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                     ++NqaI+ea+e e+ vHiiD+   +++QW+ Ll +L +R++gpp+l+iTg+++    +k+ l ++   L   A +l+ p++f + ++++led+++
  XP_027343066.1 116 MTNQAIVEAMECEQVVHIIDLHCCEPAQWIDLLLTLKNRRGGPPHLKITGIHE----KKQVLDQMSLHLITEAGNLDFPLQFYP-IVSKLEDVDF 205
                     *****************************************************....9**************************.7999****** PP

            GRAS 192 eeLrvkpgEalaVnlvlqlhrll........................................................desvsleserdevLkl 230
                     e+L vk g+ala+ +vlqlh+ll                                                              + +   +L+ 
  XP_027343066.1 206 ENLPVKIGDALAITCVLQLHSLLatddemvgrvspaaaasmnlhravhmgqrtfaewlerdminayilspdsalsplslG----ASPKMGMFLSS 296
                     **********************************************************************9997643222....2225778**** PP

            GRAS 231 vkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFk 325
                     +++l+Pk++v++eqe+++n+++++er+ +al++ysalfd+l++++ r+s er+k+E +llg++i+n++aceg +r+erhe+lekW  rle+aGF 
  XP_027343066.1 297 MRKLQPKLMVITEQESNLNGSNLMERIDRALYFYSALFDCLDSTVVRTSLERQKLESMLLGEQIKNIIACEGVDRKERHEKLEKWIPRLEMAGFV 391
                     *********************************************************************************************** PP

            GRAS 326 pvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +vpls++   +ak ll++++ + y+  ee+++l+ +W+drpL+svSaW
  XP_027343066.1 392 KVPLSYNGRIEAKNLLHRYSHK-YKFREENDCLLVCWSDRPLFSVSAW 438
                     ********************77.************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
MDSGSPYQWM RELRWDSHGL NPISLLIDCA KCVASGSIKN ADIGLEYISQ ISSPDGNAVE  60
RMVTYFSEAL GYRIIKHLPG VYKSLYSSKT SLSSEDILVQ KYFYELCPFL KFSYMMTNQA  120
IVEAMECEQV VHIIDLHCCE PAQWIDLLLT LKNRRGGPPH LKITGIHEKK QVLDQMSLHL  180
ITEAGNLDFP LQFYPIVSKL EDVDFENLPV KIGDALAITC VLQLHSLLAT DDEMVGRVSP  240
AAAASMNLHR AVHMGQRTFA EWLERDMINA YILSPDSALS PLSLGASPKM GMFLSSMRKL  300
QPKLMVITEQ ESNLNGSNLM ERIDRALYFY SALFDCLDST VVRTSLERQK LESMLLGEQI  360
KNIIACEGVD RKERHEKLEK WIPRLEMAGF VKVPLSYNGR IEAKNLLHRY SHKYKFREEN  420
DCLLVCWSDR PLFSVSAWSF RR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-139GRAS family protein