PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343017.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family NF-YC
Protein Properties Length: 278aa    MW: 31543.4 Da    PI: 9.7618
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343017.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC147.82.3e-46871891100
           NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 
                     ql +fw+kq   ie++tdf nh+lPlarik+i+k+de+vkmisa+a v+++kace+fi eltlrsw++aeenkrrtl+++dia+avtr+++f+fl
  XP_027343017.1  87 QLLNFWAKQfgeIEEKTDFSNHSLPLARIKRIMKKDEEVKMISADACVIFAKACEIFIKELTLRSWVNAEENKRRTLQRNDIATAVTRSEVFEFL 181
                     6889*****9999********************************************************************************** PP

           NF-YC  93 vdivprde 100
                      ++vprd+
  XP_027343017.1 182 AETVPRDD 189
                     ******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MDNSMEQNKQ RQPTARSSGS QAQQHLPNQN ESNQQQMIPS PNQQQIIPSP TINAHSHSAF  60
SAFMRGQQNQ CMPKPPQPDP SQALQQQLLN FWAKQFGEIE EKTDFSNHSL PLARIKRIMK  120
KDEEVKMISA DACVIFAKAC EIFIKELTLR SWVNAEENKR RTLQRNDIAT AVTRSEVFEF  180
LAETVPRDDT MEHDLYAGIQ RGGGSARNME LGPNYYRMPP PPPPPRNVAA PSYGLPSMTM  240
GRRVPNQARS RNRMTRPSGT RVWPHSQQPN RAPDSDDN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160166RRTLQRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.13e-50NF-YC family protein