PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027342900.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 319aa MW: 36252.9 Da PI: 7.2146 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.1 | 8.3e-18 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+lv++++ +G ++W+++++ g+ R++k+c++rw +yl XP_027342900.1 13 RGLWSPEEDEKLVRYINTHGHKSWSSVPKFAGLQRCGKSCRLRWINYL 60 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.6 | 1.2e-17 | 66 | 109 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+eE+++++d ++ lG++ W+ Ia++++ gRt++++k++w++ XP_027342900.1 66 RGSFTAEEEQIIIDIHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109 89********************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence |
MGHRCCSKQK IKRGLWSPEE DEKLVRYINT HGHKSWSSVP KFAGLQRCGK SCRLRWINYL 60 RPDLKRGSFT AEEEQIIIDI HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLISQGL 120 DPQTHTLLSS HRRNTACTIS NIPQNSNSIF IMSSHMPNAP METSTQTFCS LPKAPPNIVR 180 TPSCIVSSEY QTSTIVSNKF SDLPHELLIE NNTNICSPSY MNPPSVELPN NESSVWVSRV 240 NSEDFSAQTL GEGTQVQVQQ EKDMNCEKGI DIREANKANL ETNVSFESSN FDFGLLECVL 300 NSEFMSHDLN CMDELAWNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12720.1 | 5e-90 | MYB family protein |