PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027342869.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 327aa    MW: 36623.9 Da    PI: 6.1038
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027342869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.61.6e-141966148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l ++    G g+W+ +ar  g+ R++k+c++rw +yl
   XP_027342869.1 19 KGLWSPEEDDKLMNYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYL 66
                     678*******************************************97 PP
2Myb_DNA-binding52.41.2e-1672115146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E+el+++++ +lG++ W+ Ia++++ gRt++++k++w++
   XP_027342869.1  72 RGAFSPQEEELIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 115
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MRKPELCSTK NNNNSKLRKG LWSPEEDDKL MNYMLNNGQG CWSDVARNAG LQRCGKSCRL  60
RWINYLRPDL KRGAFSPQEE ELIIHLHSLL GNRWSQIAAR LPGRTDNEIK NFWNSTIKKR  120
LKNMSSTTTT STSPNASESS SEPSKDLNMG GFISTQHHHD HHASFVPMFG SSPSSMPTTV  180
LDSVIDRLPV LEYGLNMPAS GGYFKGTGSF SQSGVDNKGS FLENGVFGSV NIGVEGDMFV  240
PPLENVSTSI NHNQRVIEST CKRETNDCYF DDINSMLNNC NINNNNKGAE NKAGMESLFQ  300
EELTMGEWDF EELMKDATSF PFLDFSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08500.13e-69MYB family protein