PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342788.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 462aa MW: 50986.2 Da PI: 7.0802

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342788.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.7	6.7e-06	353	391	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L XP_027342788.1 353 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 391 5778999********998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MADEQFQASG NWWDTARNVR YESGASQSSS SAITNIGTFA WQQASDMADM KPRSSLDSSS 60 VVFHDTQNKL QPPDSSTSTD PNLHMMGLGL SSQAMEWNQA SLLRGEKGTE NSFRSMLQDN 120 LGSSRTNFQQ ETGMGLSQQV QWRPEKLFTA ESSTNEFKQV NRGFSLDQNQ FSPQYSSGNS 180 TGTSQGLPST TNFQMDSSAL YGTPSILQGV LLGPDNNNNQ QQQQQASSFE NRTMSFPYPT 240 SYGLNTNELI PSWSKVPQFL RTSPPKQQPP NNQLHFTNNA PFWNASEAAN IKDVRSSFFP 300 SLQPAFSTPN FDAQSKNISE VRDSGTVVKK SGNEPAPKRT RNETPSPLPA FKVRKEKMGD 360 RITALQQLVS PFGKTDTASV LSEAIEYIKF LHEQVTALST PYMKTGAQVQ IQQNSGKSKE 420 AEGPKQDLRS RGLCLVPVSS TFPVTHETTV DFWTPTFGGT SR

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MADEQFQASG NWWDTARNVR YESGASQSSS SAITNIGTFA WQQASDMADM KPRSSLDSSS  60
VVFHDTQNKL QPPDSSTSTD PNLHMMGLGL SSQAMEWNQA SLLRGEKGTE NSFRSMLQDN  120
LGSSRTNFQQ ETGMGLSQQV QWRPEKLFTA ESSTNEFKQV NRGFSLDQNQ FSPQYSSGNS  180
TGTSQGLPST TNFQMDSSAL YGTPSILQGV LLGPDNNNNQ QQQQQASSFE NRTMSFPYPT  240
SYGLNTNELI PSWSKVPQFL RTSPPKQQPP NNQLHFTNNA PFWNASEAAN IKDVRSSFFP  300
SLQPAFSTPN FDAQSKNISE VRDSGTVVKK SGNEPAPKRT RNETPSPLPA FKVRKEKMGD  360
RITALQQLVS PFGKTDTASV LSEAIEYIKF LHEQVTALST PYMKTGAQVQ IQQNSGKSKE  420
AEGPKQDLRS RGLCLVPVSS TFPVTHETTV DFWTPTFGGT SR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	1e-90	bHLH family protein