PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342609.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WRKY

Protein Properties

Length: 604aa MW: 65194.4 Da PI: 7.0402

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97	1.3e-30	349	407	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_027342609.1 349 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 407 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 604 aa Download sequence
MGRGCGLSID SDPIGSFILH SPTVLNSFPE DNNNNKWKAG PNNNMDGTVS RKRSPSSTPN 60 TTIPFQVNLS SPPPSHDIDE MDFFSPNTNK HHTLPSSSTS APPSLHHLHH HHHHDPTSSI 120 LELKVNTGLN LLTTNTSSDQ SMVDDDMSPN SEGKRAKSEV GSLRAEIERM RVENQQLRNM 180 LDQIEANYNS LRMQLMSLMQ EQKGQERGEE QEDQMLEEKK QTGNGGGLVP RQFMDLGLAT 240 NADTDEPSLS SSVGRSHDRS KSPAKNVEVA SKDFGPRKNG NGSDEGLVFD QDKKELGRGI 300 EREGSPSDQA LAVNNVPKFS PPRNVDQAEA TMRKARVSVR ARSEAPMITD GCQWRKYGQK 360 MAKGNPCPRA YYRCTMAAGC PVRKQVQRCA EDRTILITTY EGNHNHPLPP AAMAMAQTTS 420 SAARMLLSGS MSSADGLLNT NFLSRSLFPC SSSSMATISA SAPFPTVTLD LTQSPNPLQF 480 AKPLQIPITG VPQNYANSPG SLLPHIFGHV MCNQSKFSGL QMSHDADPSQ LGNHSQLSTP 540 QLADTVGAFA ADPNLTAALA AAITSVIGVA QPNNSTSTNN NANTTTNTTN ANITSSNNNS 600 NGKQ

Sequence ? help Back to Top

Protein Sequence Length: 604 aa Download sequence

MGRGCGLSID SDPIGSFILH SPTVLNSFPE DNNNNKWKAG PNNNMDGTVS RKRSPSSTPN  60
TTIPFQVNLS SPPPSHDIDE MDFFSPNTNK HHTLPSSSTS APPSLHHLHH HHHHDPTSSI  120
LELKVNTGLN LLTTNTSSDQ SMVDDDMSPN SEGKRAKSEV GSLRAEIERM RVENQQLRNM  180
LDQIEANYNS LRMQLMSLMQ EQKGQERGEE QEDQMLEEKK QTGNGGGLVP RQFMDLGLAT  240
NADTDEPSLS SSVGRSHDRS KSPAKNVEVA SKDFGPRKNG NGSDEGLVFD QDKKELGRGI  300
EREGSPSDQA LAVNNVPKFS PPRNVDQAEA TMRKARVSVR ARSEAPMITD GCQWRKYGQK  360
MAKGNPCPRA YYRCTMAAGC PVRKQVQRCA EDRTILITTY EGNHNHPLPP AAMAMAQTTS  420
SAARMLLSGS MSSADGLLNT NFLSRSLFPC SSSSMATISA SAPFPTVTLD LTQSPNPLQF  480
AKPLQIPITG VPQNYANSPG SLLPHIFGHV MCNQSKFSGL QMSHDADPSQ LGNHSQLSTP  540
QLADTVGAFA ADPNLTAALA AAITSVIGVA QPNNSTSTNN NANTTTNTTN ANITSSNNNS  600
NGKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-89	WRKY family protein