PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342574.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 461aa MW: 50930.9 Da PI: 6.7

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.1	0.0012	112	134	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+Cp+C+++F + ++ +H ++ XP_027342574.1 112 YECPICKQPFGSEDEVSVHVDSC 134 99****************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MGDMKDKVKG FMKKVNNPFS SSSSGKFKGQ GRVLGSASSS QPANSTPTVR PTPTQNPNSK 60 PTSSATNPRP MPQKTEHDRT TEKPRKDDGF DPFDSLVTSS KRSQNGYSLN VYECPICKQP 120 FGSEDEVSVH VDSCLSERGS DDQNGVLESE AGSNSEIELD VCVGSYISGK PSEGSVDVVL 180 KLLRNIGREP ENVKFRKIRM NNPKIKETVG EVTGGVELLS FIGFELREEN GETWAVMEVP 240 TEEQIKLIKK AIVLLESQLV QGPTKSGNSV SATNAEIDAK VEPKPVDRQV KVFFAVPESI 300 AAKIELPDSF YNLSVEEVRR EAELRRKKIA HSQLLIPKSF KEKQAKAARK RYTKAIIRIQ 360 FPDGVVLQGV FAPWEPTTAL YEFVSSALKE PGLEFELMHP VLVQRRVIPH FPKAGENART 420 IEEEDLVPSA LIKFKPMETD SVVFSGLKNE LLEISEPLVN G

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MGDMKDKVKG FMKKVNNPFS SSSSGKFKGQ GRVLGSASSS QPANSTPTVR PTPTQNPNSK  60
PTSSATNPRP MPQKTEHDRT TEKPRKDDGF DPFDSLVTSS KRSQNGYSLN VYECPICKQP  120
FGSEDEVSVH VDSCLSERGS DDQNGVLESE AGSNSEIELD VCVGSYISGK PSEGSVDVVL  180
KLLRNIGREP ENVKFRKIRM NNPKIKETVG EVTGGVELLS FIGFELREEN GETWAVMEVP  240
TEEQIKLIKK AIVLLESQLV QGPTKSGNSV SATNAEIDAK VEPKPVDRQV KVFFAVPESI  300
AAKIELPDSF YNLSVEEVRR EAELRRKKIA HSQLLIPKSF KEKQAKAARK RYTKAIIRIQ  360
FPDGVVLQGV FAPWEPTTAL YEFVSSALKE PGLEFELMHP VLVQRRVIPH FPKAGENART  420
IEEEDLVPSA LIKFKPMETD SVVFSGLKNE LLEISEPLVN G