PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342523.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 525aa MW: 57526.2 Da PI: 4.8253

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342523.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.6	1.7e-11	350	392	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++P+ + K++ a+iL A+eY+k+L XP_027342523.1 350 MAERRRRKKLNDRLYMLRSVVPNiS------KMDRASILGDAIEYLKEL 392 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence
MMSKLANGVA LAQDTEEQDS ASVSWTNSNA NINTDELSRV FVSSLCAYKP IISGINEECY 60 VANNTTQNQN NPDITKDMVF SQNFGDNPLL QSLDTSSSTV FTHLDSSQVH NFLTPNPIFS 120 SLLSAINNPL EHGFDMGSEV GFLDPQVSFT SKVLNKGDNA FLGGGFITDF TSNNNNLLDS 180 HPNLETTCIM SQVTQVGFSG LKNNNNNNNN FDHEEGSRKA LLLNKSNILK PLESLPPSGA 240 QPTLFQKRAA LWKNVTGNYK GRCELVGEGN DDKKRKTCNG EDVEVEVEVE DGSFDGSGLN 300 YDSDEMIESD NNKTEENGKD GGNSSNANST ITGVDQKGKK KKGVPAKNLM AERRRRKKLN 360 DRLYMLRSVV PNISKMDRAS ILGDAIEYLK ELLQRISDLH NELESTPAGS ALTPTLPTLP 420 CRIQEELCLS SLPSPNGQPA RVEVRLSEGR GVNIHMFCGR KPGLLLSTMR ALDDLGLDIH 480 QAVISYFNGF AMDIFRAEQC KEGEDVHLEQ IKAVLMDSAG FHGMT

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence

MMSKLANGVA LAQDTEEQDS ASVSWTNSNA NINTDELSRV FVSSLCAYKP IISGINEECY  60
VANNTTQNQN NPDITKDMVF SQNFGDNPLL QSLDTSSSTV FTHLDSSQVH NFLTPNPIFS  120
SLLSAINNPL EHGFDMGSEV GFLDPQVSFT SKVLNKGDNA FLGGGFITDF TSNNNNLLDS  180
HPNLETTCIM SQVTQVGFSG LKNNNNNNNN FDHEEGSRKA LLLNKSNILK PLESLPPSGA  240
QPTLFQKRAA LWKNVTGNYK GRCELVGEGN DDKKRKTCNG EDVEVEVEVE DGSFDGSGLN  300
YDSDEMIESD NNKTEENGKD GGNSSNANST ITGVDQKGKK KKGVPAKNLM AERRRRKKLN  360
DRLYMLRSVV PNISKMDRAS ILGDAIEYLK ELLQRISDLH NELESTPAGS ALTPTLPTLP  420
CRIQEELCLS SLPSPNGQPA RVEVRLSEGR GVNIHMFCGR KPGLLLSTMR ALDDLGLDIH  480
QAVISYFNGF AMDIFRAEQC KEGEDVHLEQ IKAVLMDSAG FHGMT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	339	358	KKKKGVPAKNLMAERRRRKK
2	340	359	KKKKGVPAKNLMAERRRRKK
3	352	359	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-115	bHLH family protein