PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027342517.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 840aa    MW: 93350.4 Da    PI: 6.8353
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027342517.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.85e-24151252199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++ +++a+e+      + k++ +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + ++
  XP_027342517.1 151 FCKTLTASDTSTHGGFSVLRRHADEClppldmS-KQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGEN 242
                     99*****************************63.4445569************************************************..4499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+v+v+r+
  XP_027342517.1 243 GELRVGVRRA 252
                     99*****996 PP
2Auxin_resp119.82.2e-39277359183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha++t+++F+v+Y+Pr+s++eF+v++++++++lk+++++GmRfkm+fe+e+++e+r++Gt+vg++d+dp rWp+SkWrsLk
  XP_027342517.1 277 AWHAIRTGTMFTVYYKPRTSPAEFIVPYDQYMESLKSNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWPKSKWRSLK 359
                     89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 840 aa     Download sequence    
MASSDVSIKG NSVNGKGENN DARNSAGECQ HASSSSSTRD AEAALYRELW HACAGPLVTV  60
PREGERVFYF PQGHIEQVEA STNQVAEQHM PVYDLPPKIL CRVINVMLKA EPDTDEVFAQ  120
VTLVPESNQN ENAVEKEAPP TPPPRFHVHS FCKTLTASDT STHGGFSVLR RHADECLPPL  180
DMSKQPPTQE LVAKDLHGNE WRFRHIFRGQ PRRHLLQSGW SVFVSSKRLV AGDAFIFLRG  240
ENGELRVGVR RAMRQQGNVP SSVISSHSMH LGVLATAWHA IRTGTMFTVY YKPRTSPAEF  300
IVPYDQYMES LKSNYTIGMR FKMRFEGEEA PEQRFTGTIV GIEDADPQRW PKSKWRSLKV  360
RWDETSNIPR PERVSQWKIE PAHAPPALNP LPMPRAKRPR SNAVPSSPDS SVLTREDPLP  420
ASGFQRVLQG QELSTLRGNF AESNESDTAE KSVAWPPVAD DEKIDVVSTS RRYASEGWMS  480
MGRHEPAYPD LLSGFGSHGD LSSHPSYVDQ TGPVANPGRK HLLDREGKHN VINPWSVMPS  540
NLSLSLLDSN IKGSAQASDT TYQVRGNIRY NSAFGDYPVL HGHKVEHPHG NLLMPPPTST  600
QFESPHSREL LPKPVSGKPS EVARHKDGDC KLFGISLLSS PIAPEPSVSQ RNVASEQPVG  660
HVHCSSHQQR KFENVQKSEH SRGSKLSDGL LTDDHEKLLQ TSQPHLNDVQ SKPHGGSARS  720
CTKVHKKGIA LGRSVDLTKF SNYDELIAEL DQLFDFGGEL SSPQKDWLIV YTDNEGDMML  780
VGDDPWQEFV AMVRKIYIYP KEEIQKMSPG TLSSRNEESA SEGADAQEIK CQLNHSASDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein