PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027342511.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 865aa    MW: 95960.4 Da    PI: 6.9502
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027342511.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.75.2e-24169270199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++ +++a+e+      + k++ +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + ++
  XP_027342511.1 169 FCKTLTASDTSTHGGFSVLRRHADEClppldmS-KQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGEN 260
                     99*****************************63.4445569************************************************..4499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+v+v+r+
  XP_027342511.1 261 GELRVGVRRA 270
                     99*****996 PP
2Auxin_resp119.72.3e-39295377183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha++t+++F+v+Y+Pr+s++eF+v++++++++lk+++++GmRfkm+fe+e+++e+r++Gt+vg++d+dp rWp+SkWrsLk
  XP_027342511.1 295 AWHAIRTGTMFTVYYKPRTSPAEFIVPYDQYMESLKSNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWPKSKWRSLK 377
                     89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 865 aa     Download sequence    
MASSDVSIKG NSVNGKGENN DARNSAGECQ HASSSSSTRD AEAALYRELW HACAGPLVTV  60
PREGERVFYF PQGHIEQVSA NRVFVATGMR FSSPEVEAST NQVAEQHMPV YDLPPKILCR  120
VINVMLKAEP DTDEVFAQVT LVPESNQNEN AVEKEAPPTP PPRFHVHSFC KTLTASDTST  180
HGGFSVLRRH ADECLPPLDM SKQPPTQELV AKDLHGNEWR FRHIFRGQPR RHLLQSGWSV  240
FVSSKRLVAG DAFIFLRGEN GELRVGVRRA MRQQGNVPSS VISSHSMHLG VLATAWHAIR  300
TGTMFTVYYK PRTSPAEFIV PYDQYMESLK SNYTIGMRFK MRFEGEEAPE QRFTGTIVGI  360
EDADPQRWPK SKWRSLKVRW DETSNIPRPE RVSQWKIEPA HAPPALNPLP MPRAKRPRSN  420
AVPSSPDSSV LTREASSKVS IDPLPASGFQ RVLQGQELST LRGNFAESNE SDTAEKSVAW  480
PPVADDEKID VVSTSRRYAS EGWMSMGRHE PAYPDLLSGF GSHGDLSSHP SYVDQTGPVA  540
NPGRKHLLDR EGKHNVINPW SVMPSNLSLS LLDSNIKGSA QASDTTYQVR GNIRYNSAFG  600
DYPVLHGHKV EHPHGNLLMP PPTSTQFESP HSRELLPKPV SGKPSEVARH KDGDCKLFGI  660
SLLSSPIAPE PSVSQRNVAS EQPVGHVHCS SHQQRKFENV QKSEHSRGSK LSDGLLTDDH  720
EKLLQTSQPH LNDVQSKPHG GSARSCTKVH KKGIALGRSV DLTKFSNYDE LIAELDQLFD  780
FGGELSSPQK DWLIVYTDNE GDMMLVGDDP WQEFVAMVRK IYIYPKEEIQ KMSPGTLSSR  840
NEESASEGAD AQEIKCQLNH SASDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein