PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342489.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 441aa MW: 48606.3 Da PI: 7.8182

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342489.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.4	2.2e-12	368	413	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+ l Pk+ +k s a++L +AveYIk+Lq XP_027342489.1 368 SIAERVRRTRISERIKKLQGLFPKS----DKQTSTADMLDLAVEYIKDLQ 413 689*******************9....788***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MSVMYSPVLK YSDVELRRNQ EMDSSIGHPQ QHCHQPNSGL FRYRSAPSSL LASLIDNNIN 60 GCPNEESFTS EDHHHYLPST TSEMETMLSK LVSSNNGWSS SESLQEFGGK PVKQEMGASV 120 PQGPKQQQQN GYSYGGSQLI YQSQQIQGLP NVSSSAAGNA FDGSFGVVNT MTSENSTQSK 180 MGVRNCSNLL RQKSSPAGFF SIENDLAALR EVGSFKASDV TNRQANASTS GLHGTLIFSS 240 RPSSCMKRMP QIAENGNESL EENCVQSRNL VNDSGNSRCY IPNFSEIWDT SAFTAQKSES 300 EDEIMFSTSN GLESQEADIC YQNLGLTHHL SLPSSSTKMT SIEKILQIQG SVPCKIRAKR 360 GFATHPRSIA ERVRRTRISE RIKKLQGLFP KSDKQTSTAD MLDLAVEYIK DLQQQVKILT 420 DCKAKCKCTS YEKKQCTKAC A

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MSVMYSPVLK YSDVELRRNQ EMDSSIGHPQ QHCHQPNSGL FRYRSAPSSL LASLIDNNIN  60
GCPNEESFTS EDHHHYLPST TSEMETMLSK LVSSNNGWSS SESLQEFGGK PVKQEMGASV  120
PQGPKQQQQN GYSYGGSQLI YQSQQIQGLP NVSSSAAGNA FDGSFGVVNT MTSENSTQSK  180
MGVRNCSNLL RQKSSPAGFF SIENDLAALR EVGSFKASDV TNRQANASTS GLHGTLIFSS  240
RPSSCMKRMP QIAENGNESL EENCVQSRNL VNDSGNSRCY IPNFSEIWDT SAFTAQKSES  300
EDEIMFSTSN GLESQEADIC YQNLGLTHHL SLPSSSTKMT SIEKILQIQG SVPCKIRAKR  360
GFATHPRSIA ERVRRTRISE RIKKLQGLFP KSDKQTSTAD MLDLAVEYIK DLQQQVKILT  420
DCKAKCKCTS YEKKQCTKAC A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	5e-46	bHLH family protein