PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342484.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HSF

Protein Properties

Length: 482aa MW: 54294.2 Da PI: 6.0674

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342484.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.8	9.9e-35	18	108	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y++++d+++++++sws+++ sfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+kv+ e+ weF+++ F k++k+ll++ XP_027342484.1 18 FLLKTYDMVDDSSTDDIVSWSSTNGSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKVHPER---------WEFANDDFVKDQKHLLKN 103 9******************999*************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_027342484.1 104 IHRRK 108 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MDGAPPSAAV GTGGPAPFLL KTYDMVDDSS TDDIVSWSST NGSFVVWNPP EFARLLLPTY 60 FKHNNFSSFI RQLNTYGFRK VHPERWEFAN DDFVKDQKHL LKNIHRRKPI HSHSHPPGSP 120 VDPERAAFEE EIEKLSREKT ALESNIYSFK QHQSTAKLQL EDFLQRLDGI EKRQKQLLNF 180 FEKALHNPTF VEHLSRKIES MDLSAYNKKR RLPLVDHMQP VAESNFMDSH SNFRMEFGNV 240 FHQDFSNKLR LELSPAVSDM NLVSRSTQSS NEEGGSPQKK LSEEPKGVQT RTALAFPPET 300 LELADTGASF TFKMDSCLSR RATTAESPKL HSLEPSSEEG DSHISCQLNL TLASCPLQVN 360 RNSYSARSPQ IDCQEIGKLA ESRFFANGKE SDSGVSSNRN VAAETANLAS SHEAPSNNQV 420 NPAAPDRVND VFWEQFLTER PGCSDNEEAI SNYRANPYDE QDEGRSVHGI SRNIKNMDQL 480 TL

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MDGAPPSAAV GTGGPAPFLL KTYDMVDDSS TDDIVSWSST NGSFVVWNPP EFARLLLPTY  60
FKHNNFSSFI RQLNTYGFRK VHPERWEFAN DDFVKDQKHL LKNIHRRKPI HSHSHPPGSP  120
VDPERAAFEE EIEKLSREKT ALESNIYSFK QHQSTAKLQL EDFLQRLDGI EKRQKQLLNF  180
FEKALHNPTF VEHLSRKIES MDLSAYNKKR RLPLVDHMQP VAESNFMDSH SNFRMEFGNV  240
FHQDFSNKLR LELSPAVSDM NLVSRSTQSS NEEGGSPQKK LSEEPKGVQT RTALAFPPET  300
LELADTGASF TFKMDSCLSR RATTAESPKL HSLEPSSEEG DSHISCQLNL TLASCPLQVN  360
RNSYSARSPQ IDCQEIGKLA ESRFFANGKE SDSGVSSNRN VAAETANLAS SHEAPSNNQV  420
NPAAPDRVND VFWEQFLTER PGCSDNEEAI SNYRANPYDE QDEGRSVHGI SRNIKNMDQL  480
TL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-162	HSF family protein