PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342348.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 513aa MW: 56547.5 Da PI: 4.5603

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342348.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.9	8.3e-17	40	87	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +lv++vk++G g+W+++ + g+ R++k+c++rw ++l XP_027342348.1 40 KGPWTAAEDAILVEYVKKYGEGNWNAVLTKSGLARCGKSCRLRWANHL 87 79******************************************9986 PP
2	Myb_DNA-binding	50	6.9e-16	93	136	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T eE+ +++++++++G++ W++ a++++ gRt++++k++w++ XP_027342348.1 93 KGAFTSEEERKIIELHAKMGNK-WARMAAELP-GRTDNEIKNYWNT 136 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MSGMTSRGDS RKCLRGRRSS SMGDEAGGEG SSGGEGPLKK GPWTAAEDAI LVEYVKKYGE 60 GNWNAVLTKS GLARCGKSCR LRWANHLRPD LKKGAFTSEE ERKIIELHAK MGNKWARMAA 120 ELPGRTDNEI KNYWNTRVKR MQRAGLPIYP DELCQQLLNG NEESQNVGNL TNDATQHNDF 180 SQIDNFDIPD VDFKTFNFCP GLSNGPSIFD MLDSSLFEQS SGSPHNYNMF PPMHSSKRLR 240 ESDMLYTSSG SCIGNTVPVF NQYGNYPCEN IPDHPTLSSP YDPLLDTSDQ FYDGNLTGSH 300 ASLNGNITSS SAPIYGAMKL ELPSLQYAET QHGSWGRPTS SLPSLESVDT LIQSTPIEPI 360 QSEAVYPQSS GLLEAIVYNS KSSKGSNNDS LQETTNMPNE AVKTEWDEQG EPYSLAQSAA 420 LVMTDYTPMS MCSVDGALAE ITQDHDIKHE TVSQLPDYNS RKEEILNQID FTQSDALFDL 480 GWFGDNIEHG NDQSVIKGAF LNALLGDDFQ GKQ

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MSGMTSRGDS RKCLRGRRSS SMGDEAGGEG SSGGEGPLKK GPWTAAEDAI LVEYVKKYGE  60
GNWNAVLTKS GLARCGKSCR LRWANHLRPD LKKGAFTSEE ERKIIELHAK MGNKWARMAA  120
ELPGRTDNEI KNYWNTRVKR MQRAGLPIYP DELCQQLLNG NEESQNVGNL TNDATQHNDF  180
SQIDNFDIPD VDFKTFNFCP GLSNGPSIFD MLDSSLFEQS SGSPHNYNMF PPMHSSKRLR  240
ESDMLYTSSG SCIGNTVPVF NQYGNYPCEN IPDHPTLSSP YDPLLDTSDQ FYDGNLTGSH  300
ASLNGNITSS SAPIYGAMKL ELPSLQYAET QHGSWGRPTS SLPSLESVDT LIQSTPIEPI  360
QSEAVYPQSS GLLEAIVYNS KSSKGSNNDS LQETTNMPNE AVKTEWDEQG EPYSLAQSAA  420
LVMTDYTPMS MCSVDGALAE ITQDHDIKHE TVSQLPDYNS RKEEILNQID FTQSDALFDL  480
GWFGDNIEHG NDQSVIKGAF LNALLGDDFQ GKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	4e-88	MYB family protein