PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342311.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HSF

Protein Properties

Length: 365aa MW: 41647.1 Da PI: 4.6602

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342311.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.9	5.2e-36	17	108	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Flkk y+++ed++++++iswse g+sfv+ld +ef+ ++Lp+yFkh+nf+SF+RQLn+YgF+k+++++ weF++++F +g+k+ll++ XP_027342311.1 17 FLKKCYDMVEDQKTESIISWSEGGDSFVILDITEFSVTLLPTYFKHNNFSSFIRQLNIYGFRKIDTDR---------WEFANENFVRGQKDLLKN 102 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k+ XP_027342311.1 103 IRRRKH 108 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MVKSNDNGSG SGSVAPFLKK CYDMVEDQKT ESIISWSEGG DSFVILDITE FSVTLLPTYF 60 KHNNFSSFIR QLNIYGFRKI DTDRWEFANE NFVRGQKDLL KNIRRRKHPH TVDQQKALPQ 120 QDNCEEPSHE SPHHGLWKEV ENLKSDKNSL MQELVKLRQH QESSDNKLLL LSDRLQGMEK 180 HQQQMLSFLV MVVQSPGFMV QLLQPKENNW RLAEPGNILD QDKQDDRPVT SDGMIIKYKP 240 PVGEKLKPVV PLSPGFDKQP EPEISVDGLK DLCISSEFLK VLQDEKLCPL ENHSPFLLPD 300 LPDDGSWEQL FLGSPFLANI QDSNNDSEGC PVSGTEMEPI ISETPDESCR TFESMIVEME 360 KIGKE

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MVKSNDNGSG SGSVAPFLKK CYDMVEDQKT ESIISWSEGG DSFVILDITE FSVTLLPTYF  60
KHNNFSSFIR QLNIYGFRKI DTDRWEFANE NFVRGQKDLL KNIRRRKHPH TVDQQKALPQ  120
QDNCEEPSHE SPHHGLWKEV ENLKSDKNSL MQELVKLRQH QESSDNKLLL LSDRLQGMEK  180
HQQQMLSFLV MVVQSPGFMV QLLQPKENNW RLAEPGNILD QDKQDDRPVT SDGMIIKYKP  240
PVGEKLKPVV PLSPGFDKQP EPEISVDGLK DLCISSEFLK VLQDEKLCPL ENHSPFLLPD  300
LPDDGSWEQL FLGSPFLANI QDSNNDSEGC PVSGTEMEPI ISETPDESCR TFESMIVEME  360
KIGKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	1e-100	HSF family protein