PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027342142.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 509aa    MW: 56889.7 Da    PI: 6.6004
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027342142.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2361.7e-721415083373
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgd........pmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 
                     + L+e+A a+s+g+l +a+++L+ l  ++ ++ +        + qR +a +  AL++r++          pp   ++  s+e++ +++l+ + + 
  XP_027342142.1 141 QWLMEAASAISQGNLDAASKFLQILALRSFSNLNwngknitnSDQRFTASMISALKSRMQL---------PPHLPQQLFSVEHAESTRLLLHHCF 226
                     78*********************999885444333355676799***************97.........55555555599************** PP

            GRAS  90 ilkfshltaNqaIleavege..erv..HiiDfdisqGlQWpaLlqaLasRpeg.ppslRiTgvgspesgskeele.etgerLakfAeelgvpfef 178
                     +++ +  +aN +Il+++ +   ++v   ++Df+i++G+Q++ Llq L+   +g  + ++iT+v+ +e +  ++le  +g  L+++A +lg+ + f
  XP_027342142.1 227 CFNAAVTAANITILQSAFNIqnQKVnlSVVDFNIGNGMQYVQLLQLLSVNVNGmIAVVKITAVVFAERS-FNMLEtMVGPMLRQLALALGIVLLF 320
                     **************97643324555559********************777551679********6654.455541689**************** PP

            GRAS 179 nvl.vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                     nv+ +++ +++l+ e+L ++ +E l Vn+v+ l +++desv + ++rde+L+ vk l P vv+++eqe++ n+++F +r++e+++yy+alf+s+e
  XP_027342142.1 321 NVVtLTSGIAELTRESLGCDADERLSVNFVFTLSKVPDESVLVGNPRDELLRRVKALAPCVVTLAEQEMNANTAPFTTRVAESCSYYAALFESIE 415
                     **955569**************************************************************************************9 PP

            GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpL 367
                     + +  ++  r+k+E   l+r+i n +aceg++r+er+e ++kWr+r+++aG++  + +e++        +  + +g++v+ ++g++++ Wk+++L
  XP_027342142.1 416 SYV-FTDTVRVKIETG-LSRKINNTIACEGRNRVERCEVFGKWRARMSMAGYELKTSTESIC------YQLAPPEGFSVKLDNGAVFFAWKGKAL 502
                     996.7899********.**********************************99776665554......4556789******************** PP

            GRAS 368 vsvSaW 373
                     +++SaW
  XP_027342142.1 503 TFASAW 508
                     ****** PP
Sequence ? help Back to Top
Protein Sequence    Length: 509 aa     Download sequence    
MDAGLTAAVP HAPNTNPKYR TQVQHQEQEQ EQERQTLTQK RRFAQIETHN NNNNVNNDEE  60
LTGTGLGYSC SWVSNDNKTM MMHQRLMEME NQLLGERDDE ERDAASTITN SEVYRTMERL  120
MGPTQTPTPT QNQKPLTSSK QWLMEAASAI SQGNLDAASK FLQILALRSF SNLNWNGKNI  180
TNSDQRFTAS MISALKSRMQ LPPHLPQQLF SVEHAESTRL LLHHCFCFNA AVTAANITIL  240
QSAFNIQNQK VNLSVVDFNI GNGMQYVQLL QLLSVNVNGM IAVVKITAVV FAERSFNMLE  300
TMVGPMLRQL ALALGIVLLF NVVTLTSGIA ELTRESLGCD ADERLSVNFV FTLSKVPDES  360
VLVGNPRDEL LRRVKALAPC VVTLAEQEMN ANTAPFTTRV AESCSYYAAL FESIESYVFT  420
DTVRVKIETG LSRKINNTIA CEGRNRVERC EVFGKWRARM SMAGYELKTS TESICYQLAP  480
PEGFSVKLDN GAVFFAWKGK ALTFASAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.15e-97GRAS family protein