PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027341569.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | CO-like | ||||||||
Protein Properties | Length: 341aa MW: 38161.4 Da PI: 4.7138 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 23.6 | 1.1e-07 | 16 | 59 | 3 | 40 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 +r C+ + + ++++fC ++ +lC+ C + H+ H++v XP_027341569.1 16 ARACDSCVRRRARWFCAADDAFLCHGCDTLVHSAnqlasrHERV 59 578*****************************657788888876 PP | |||||||
2 | CCT | 23.9 | 1.5e-09 | 318 | 339 | 1 | 22 |
CCT 1 ReaallRYkeKrktRkFeKkir 22 Rea+++RY+eKr+tR+F Kki+ XP_027341569.1 318 REARVSRYREKRRTRLFAKKIS 339 9*******************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MMTDMKAAGA LGAKTARACD SCVRRRARWF CAADDAFLCH GCDTLVHSAN QLASRHERVR 60 LQTASSKVTT WHSGFTRKAR TPRHNNNKHF ALQQRLKDQV LFNNASVLPV VPELGGVDND 120 EIEEEQLLCR VPVFDPFDAE PSSAYGMKEN DMESFSDRFD MDFVEFAADV ESLLTGVDED 180 SINYKLEENE VGGGGKSAMV RVEDEEELDD DIACHVESVL DMTNEDVFRW NNIDSVLSGA 240 REEKESVVVD NVGVSEEVGT KRDIFLRLNY DEVITAWASQ GSSPWKSAIN SDYDLCLGSS 300 GENGEVIRSL RGHLDGGREA RVSRYREKRR TRLFAKKISC S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25440.1 | 5e-57 | CO-like family protein |