PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027341567.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

CO-like

Protein Properties

Length: 370aa MW: 41778.7 Da PI: 5.5298

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027341567.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.4	1.2e-07	16	59	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 +r C+ + + ++++fC ++ +lC+ C + H+ H++v XP_027341567.1 16 ARACDSCVRRRARWFCAADDAFLCHGCDTLVHSAnqlasrHERV 59 578*****************************657788888876 PP
2	CCT	66.8	5.8e-23	318	360	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 Rea+++RY+eKr+tR+F KkirYe+RK +Ae+RpR+KGrFvk+ XP_027341567.1 318 REARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKR 360 9****************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MMTDMKAAGA LGAKTARACD SCVRRRARWF CAADDAFLCH GCDTLVHSAN QLASRHERVR 60 LQTASSKVTT WHSGFTRKAR TPRHNNNKHF ALQQRLKDQV LFNNASVLPV VPELGGVDND 120 EIEEEQLLCR VPVFDPFDAE PSSAYGMKEN DMESFSDRFD MDFVEFAADV ESLLTGVDED 180 SINYKLEENE VGGGGKSAMV RVEDEEELDD DIACHVESVL DMTNEDVFRW NNIDSVLSGA 240 REEKESVVVD NVGVSEEVGT KRDIFLRLNY DEVITAWASQ GSSPWKSAIN SDYDLCLGSS 300 GENGEVIRSL RGHLDGGREA RVSRYREKRR TRLFAKKIRY EVRKLNAEKR PRMKGRFVKR 360 TCFVGNTAYH

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MMTDMKAAGA LGAKTARACD SCVRRRARWF CAADDAFLCH GCDTLVHSAN QLASRHERVR  60
LQTASSKVTT WHSGFTRKAR TPRHNNNKHF ALQQRLKDQV LFNNASVLPV VPELGGVDND  120
EIEEEQLLCR VPVFDPFDAE PSSAYGMKEN DMESFSDRFD MDFVEFAADV ESLLTGVDED  180
SINYKLEENE VGGGGKSAMV RVEDEEELDD DIACHVESVL DMTNEDVFRW NNIDSVLSGA  240
REEKESVVVD NVGVSEEVGT KRDIFLRLNY DEVITAWASQ GSSPWKSAIN SDYDLCLGSS  300
GENGEVIRSL RGHLDGGREA RVSRYREKRR TRLFAKKIRY EVRKLNAEKR PRMKGRFVKR  360
TCFVGNTAYH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	329	345	RRTRLFAKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	7e-74	CO-like family protein