PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027341478.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 304aa    MW: 33111.1 Da    PI: 4.4499
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027341478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.4e-05279302123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     ++C+ C+k F++   L++H +  H
  XP_027341478.1 279 FSCKSCSKAFTSEGGLQQHSKAkH 302
                     89*****************88777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MEFWGAEVKV GEVVKVDPTE FEACIHLSQA ALGEAKKDKP SEPVVVYLKV GDQKFVLGTL  60
SKEKIPQISL ELVLEKEFQL SHNSKNASVY FCGYKAYYAG DDSEEDDFTD SDEDLPLTST  120
ENGKPETKAD DLKVPESKKV PESKKPDAKV GTSAKQVKVV EPKKDVEEDS DDESDEDDDD  180
FGSSDDEMED VDNDSDDESD SDEDDDVETP PKKADLGKKR LNDSASKTPI PSKKSKNATP  240
EKTDGKKTAH TATPHPTKKG GKTPNSEGKD QTPKSGGQFS CKSCSKAFTS EGGLQQHSKA  300
KHGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03740.11e-23C2H2 family protein