PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027341477.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 315aa MW: 36193.3 Da PI: 7.6974 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.7 | 2.8e-18 | 19 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll++++ +G g+W++ a++ g++Rt+k+c++rw++yl XP_027341477.1 19 RGPWTLEEDNLLAQYISNHGEGRWNLLAKRSGLKRTGKSCRLRWLNYL 66 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.6 | 1.1e-16 | 72 | 115 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ XP_027341477.1 72 RGNLTPQEQLLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 115 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MSTSKSISSS SEDDNELRRG PWTLEEDNLL AQYISNHGEG RWNLLAKRSG LKRTGKSCRL 60 RWLNYLKPDV KRGNLTPQEQ LLILELHSKW GNRWSKIAQH LPGRTDNEIK NYWRTRIQKQ 120 ARHLRIETDS TEFQELVRHF WVPRLLQKAR ESSSSAMSIH NQPIPLPLDG VSQHLTVGTI 180 PTQAPMQGPC MNEAGSTYLD QHEHNSDSEH NNGSCISLSE SANIPKVHQD LGYTTRQFHA 240 LNNNNNFGTY TYDGYHVNNN AYEIDTFKIA TPRVTEHVQY PVGDCQMAGS NWVNNGFACS 300 MWNMDELWQF SNLQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25340.1 | 2e-80 | MYB family protein |