PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027341407.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family NF-YC
Protein Properties Length: 298aa    MW: 33018.5 Da    PI: 5.544
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027341407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC56.37.1e-1819952298
           NF-YC 22 PlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
                      arikki++adedv +i+  +Pvl+ska elf+ +l  r++  + +   +t++   ++ +v++ ++fdfl div r
  XP_027341407.1 19 FKARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSYNVFDFLRDIVSR 95
                    569***********************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MCCFCCHIVH LLDQSAHIFK ARIKKIMQAD EDVGKIALAV PVLVSKALEL FLQDLCDRTY  60
EITLQRGAKT MNALHLKHCV QSYNVFDFLR DIVSRVPDYG HGHGHGHGHS EVGADDRALP  120
KRRKAVGDDG NDSDEETKRS KMHELGHTGT TGRGRGRGRG RGRGRGARNV EREASHQQVE  180
SEPCTSVHQS SKDIPNTTVA IDDPESKELS KENTAVSEES TQSFRNIDLN ANLNENEDKN  240
TSVAAQASLP EPAATEIKHE EIPGWSLSDV DKMAIDTMQL ANLGNRLQED EEDYDEEG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153162RGRGRGRGRG
2153163RGRGRGRGRGR
3155164RGRGRGRGRG
4155165RGRGRGRGRGR
5157166RGRGRGRGRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12480.19e-66NF-YC family protein